YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30263772, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	250 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30263772, gi|....

Description	E-value	Query Range	Subject Range
gi\|47555097, gi\|... - gi\|47568269\|ref\|ZP_00238972.1\| bsaE, putative [Bacillus cereus G9241], gi\|47555097\|gb\|EAL13445.1\| bs...	9.0E-66	[1..250]	[1..250]
gi\|28202793, gi\|... - gi\|28210356\|ref\|NP_781300.1\| lantibiotic permease protein spaE/mutE [Clostridium tetani E88], gi\|282...	8.0E-60	[1..250]	[1..249]
gi\|65321092, gi\|... - gi\|65321092\|ref\|ZP_00394051.1\| COG4200: Uncharacterized protein conserved in bacteria [Bacillus anth...	1.0E-59	[1..242]	[1..240]
gi\|16223976 - gi\|16223976\|gb\|AAL15572.1\|AF233755_10 putative SpaE [Bacillus subtilis]	5.0E-58	[1..244]	[1..237]
gi\|9802353 - gi\|9802353\|gb\|AAF99692.1\|AF267498_2 MutE [Streptococcus mutans]	1.0E-55	[1..250]	[1..251]
gi\|82748419, gi\|... - gi\|82748419\|ref\|ZP_00910903.1\| lantibiotic permease protein spaE/mutE [Clostridium beijerincki NCIMB...	2.0E-53	[1..250]	[2..250]
gi\|52346638, gi\|... - gi\|52784136\|ref\|YP_089965.1\| hypothetical protein BLi00313 [Bacillus licheniformis ATCC 14580], gi\|5...	3.0E-50	[4..244]	[5..238]
gi\|23494815, gi\|... - gi\|23577989\|ref\|NP_702936.1\| hypothetical protein CE3P003 [Corynebacterium efficiens], gi\|23494815\|d... gi\|23577989\|ref\|... - hypothetical protein [Corynebacterium efficiens], hypothetical protein CE3P003 [Corynebacterium effi...	2.0E-45	[3..232]	[23..246]
gi\|56909220, gi\|... - gi\|56962981\|ref\|YP_174708.1\| lantibiotic ABC transporter permease [Bacillus clausii KSM-K16], gi\|569...	4.0E-43	[2..244]	[3..238]

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Predicted Domain #1

Region A:
Residues: [1-250]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLYIASEKI KIRHTFLNKL TWLVPFATML IAFLLSADYF QLSSYNWWYI TMLPGMVSLS  60
   61 CVLLAEKDKK MNNRSILSLP ASLKRVWISK VLLILGILSF SCILFFCGIE LSSLLVNKEN 120
  121 FRIIPTVNAL LGSVLLIVTF MWQIPICLFL GNKIGLFPTL LLNVGANGIF GVVLATKNIW 180
  181 MISPYTYPSR LMIPILKILP NGLYAETGSV TFKPELLSYD AILPGIVISV VLFLLFTYVT 240
  241 AKWFEKQEAK

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits