YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30260005, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	133 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260005, gi|....

Description	E-value	Query Range	Subject Range
ATPE_JASNU - ATP synthase epsilon chain, chloroplastic OS=Jasminum nudiflorum GN=atpE PE=3 SV=1	4.0E-41	[3..132]	[2..131]
gi\|110456745 - gi\|110456745\|gb\|ABG74840.1\| ATPase epsilon subunit [Menodora longiflora]	4.0E-41	[3..132]	[2..131]
ATPE_MORIN - ATP synthase epsilon chain, chloroplastic OS=Morus indica GN=atpE PE=3 SV=1	5.0E-41	[3..132]	[2..131]
gi\|110456644 - gi\|110456644\|gb\|ABG74763.1\| ATPase epsilon subunit [Jasminum leratii]	6.0E-41	[3..132]	[2..131]
gi\|110456681 - gi\|110456681\|gb\|ABG74790.1\| ATPase epsilon subunit [Jasminum abyssinicum]	7.0E-41	[3..132]	[2..131]
gi\|22796294 - gi\|22796294\|emb\|CAD23967.1\| ATP synthase epsilon subunit [Grevea sp. Thulin et al. s.n.]	9.0E-41	[3..132]	[1..130]
ATPE_SPIOL - ATP synthase epsilon chain, chloroplastic OS=Spinacia oleracea GN=atpE PE=1 SV=1	1.0E-40	[3..131]	[2..130]
gi\|110456713 - gi\|110456713\|gb\|ABG74816.1\| ATPase epsilon subunit [Jasminum subhumile]	1.0E-40	[3..132]	[2..131]
gi\|22796595 - gi\|22796595\|emb\|CAD23901.1\| ATP synthase epsilon subunit [Hydrangea aspera]	2.0E-40	[3..132]	[1..130]
ATPE_CALFG - ATP synthase epsilon chain, chloroplastic OS=Calycanthus floridus var. glaucus GN=atpE PE=3 SV=1	2.0E-40	[3..132]	[2..131]

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Predicted Domain #1

Region A:
Residues: [1-133]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTFPVSIVT PDGPVYEKEV EMVSVKAESG EMGILPGHIP TVAPLKISAV RLKNGGHTDY  60
   61 VAVSGGFIEV RPDKVTVLSS SAEEANHIDI HRANEAKRRA EQRMQDKQAH VDFKRAEMAL 120
  121 QRAVNRLNVS DMK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.69897
Match:	2e5yA
Description:	No description for 2e5yA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits