YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30253834, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	227 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30253834, gi|....

Description	E-value	Query Range	Subject Range
PURQ_BACCZ - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cereus (strain ZK / E33L) GN=pur... PURQ_BACCQ - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cereus (strain Q1) GN=purQ PE=3 ...	3.0E-48	[1..227]	[1..227]
gi\|47569937, gi\|... - gi\|47569937\|ref\|ZP_00240602.1\| phosphoribosylformylglycinamidine synthase I [Bacillus cereus G9241],...	3.0E-48	[1..227]	[1..227]
PURQ_BACWK - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus weihenstephanensis (strain KBAB4...	7.0E-48	[1..227]	[1..227]
PURQ_OCEIH - Phosphoribosylformylglycinamidine synthase 1 OS=Oceanobacillus iheyensis GN=purQ PE=3 SV=1 PURQ_OCEIH - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Oceanobacillus iheyensis (strain DSM 1437...	8.0E-48	[1..227]	[1..228]
PURQ_BACC4 - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cereus (strain B4264) GN=purQ PE... PURQ_BACCR - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cereus (strain ATCC 14579 / DSM ...	1.0E-47	[1..227]	[1..227]
PURQ_BACCN - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus cytotoxicus (strain DSM 22905 / ...	4.0E-47	[1..227]	[1..227]
gi\|89101010, gi\|... - gi\|89101010\|ref\|ZP_01173853.1\| phosphoribosylformylglycinamidine synthase subunit I [Bacillus sp. NR...	5.0E-45	[1..227]	[1..228]
PURQ_GEOKA - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Geobacillus kaustophilus (strain HTA426) ... PURQ_GEOKA - Phosphoribosylformylglycinamidine synthase 1 OS=Geobacillus kaustophilus GN=purQ PE=3 SV=1	5.0E-45	[1..227]	[1..228]
gi\|221312805 - gi\|221312805\|ref\|ZP_03594610.1\| phosphoribosylformylglycinamidine synthase subunit I [Bacillus subti... PURQ_BACSU - Phosphoribosylformylglycinamidine synthase 1 OS=Bacillus subtilis GN=purQ PE=3 SV=1 gi\|221317729 - gi\|221317729\|ref\|ZP_03599023.1\| phosphoribosylformylglycinamidine synthase subunit I [Bacillus subti... PURQ_BACSU - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus subtilis (strain 168) GN=purQ PE... gi\|221322007 - gi\|221322007\|ref\|ZP_03603301.1\| phosphoribosylformylglycinamidine synthase subunit I [Bacillus subti...	1.0E-44	[1..227]	[1..227]
PURQ_BACHD - Phosphoribosylformylglycinamidine synthase subunit PurQ OS=Bacillus halodurans (strain ATCC BAA-125 ... PURQ_BACHD - Phosphoribosylformylglycinamidine synthase 1 OS=Bacillus halodurans GN=purQ PE=3 SV=1	3.0E-44	[1..226]	[1..226]

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Predicted Domain #1

Region A:
Residues: [1-227]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFAVIVFPG SNCDVDMFHA IKDELGEEVD YVWHDTENLD EYDAILLPGG FSYGDYLRCG  60
   61 AISRFANAMK AVQKAAEQGK PILGVCNGFQ ILVESGLLPG ALMRNENLKF MCRTVQLRVE 120
  121 NNETMFTSQY EKDEVINIPI AHGEGNYYCD EETLKQLEEN NQIAFRYVEN PNGSVSDIAG 180
  181 IVNEKGNVLG MMPHPERAVD ELLGGAEGLK VFQSILKQWR ETYVVNA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	26.0
Match:	1t3tA
Description:	Structure of Formylglycinamide synthetase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
carbon-nitrogen ligase activity, with glutamine as amido-N-donor	3.1043669360156	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	2.56186360117064	bayes_pls_golite062009
phosphoribosylformylglycinamidine synthase activity	2.11687258439612	bayes_pls_golite062009
catalytic activity	1.67435536171189	bayes_pls_golite062009
carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity	0.93238515268938	bayes_pls_golite062009
carbamoyl-phosphate synthase activity	0.91202213061505	bayes_pls_golite062009
ligase activity	0.47575409275683	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: