YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30258819, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	304 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30258819, gi|....

Description	E-value	Query Range	Subject Range
gi\|85775968, gi\|... - gi\|86159457\|ref\|YP_466242.1\| aldo/keto reductase [Anaeromyxobacter dehalogenans 2CP-C], gi\|85775968\|...	7.0E-90	[1..304]	[1..317]
gi\|50119681, gi\|... - gi\|50119681\|ref\|YP_048848.1\| putative aldo/keto reductase [Pectobacterium atrosepticum SCRI1043], gi...	3.0E-89	[1..304]	[1..319]
gi\|126194344, gi... - gi\|254240966\|ref\|ZP_04934288.1\| hypothetical protein PA2G_01646 [Pseudomonas aeruginosa 2192], gi\|19... gi\|11351605 - pir\|\|H83328 probable oxidoreductase PA2535 [imported] - Pseudomonas aeruginosa (strain PAO1) gi\|218771712, gi... - gi\|218891486\|ref\|YP_002440353.1\| putative oxidoreductase [Pseudomonas aeruginosa LESB58], gi\|2187717... gi\|15597731, gi\|... - gi\|9948592\|gb\|AAG05923.1\|AE004681_5 probable oxidoreductase [Pseudomonas aeruginosa PAO1], gi\|155977...	1.0E-87	[1..304]	[1..320]
gi\|116050479, gi... - gi\|32037528\|ref\|ZP_00135800.1\| COG0667: Predicted oxidoreductases (related to aryl-alcohol dehydroge...	3.0E-87	[1..304]	[1..320]
gi\|115365408, gi... - gi\|115377607\|ref\|ZP_01464804.1\| aldo/keto reductase [Stigmatella aurantiaca DW4/3-1], gi\|115365408\|g...	8.0E-87	[1..304]	[1..318]
gi\|186684841, gi... - gi\|23125522\|ref\|ZP_00107451.1\| COG0667: Predicted oxidoreductases (related to aryl-alcohol dehydroge...	9.0E-87	[1..304]	[1..317]
gi\|28869977, gi\|... - gi\|28869977\|ref\|NP_792596.1\| aldo/keto reductase family oxidoreductase [Pseudomonas syringae pv. tom... tr\|Q881U1\|Q881U1... - Oxidoreductase, aldo/keto reductase family OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=PSP...	9.0E-87	[1..304]	[1..320]
gi\|66780950, gi\|... - gi\|94986270\|ref\|YP_605634.1\| aldo/keto reductase [Deinococcus geothermalis DSM 11300], gi\|94556551\|g...	3.0E-86	[1..304]	[1..315]
gi\|83756441, gi\|... - gi\|83815047\|ref\|YP_446502.1\| aldo/keto reductase [Salinibacter ruber DSM 13855], gi\|83756441\|gb\|ABC4...	6.0E-86	[2..304]	[69..384]
gi\|68179876, gi\|... - gi\|95929754\|ref\|ZP_01312495.1\| aldo/keto reductase [Desulfuromonas acetoxidans DSM 684], gi\|95134050...	9.0E-86	[1..304]	[1..317]

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Predicted Domain #1

Region A:
Residues: [1-304]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKRQLGNSD LFVTEMGLGC MSLGTSEAEA MRIIDEAIDL GINFFDTADL YDYGLNEEFV  60
   61 GKALKGKRDQ IVLTTKVGNR WTEEKNGWSW DPSKNYIKAE VKESLRRLQT DYIDLYQLHG 120
  121 GTIEDPIDET IEAFEELKKE GIIRHYGISS IRPNVIREYA KRSNIVSVLM EYSLLNRRPE 180
  181 EWFPLLNEHQ ISVIARGPLA KGILTDNNAR KIERVKEKDY LSYSYDELYG TLANVKELIV 240
  241 ESSLTGTAIQ YCLHNDTVAA VIPGASSIQQ LRENVQACKQ TQLTTEEYIQ LQQIAKCDTY 300
  301 ALHR

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	75.0
Match:	1ynpA
Description:	aldo-keto reductase AKR11C1 from Bacillus halodurans (apo form)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits