YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|158429379, gi...
Organism:	Aquifex aeolicus
Length:	178 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|158429379, gi....

Description	E-value	Query Range	Subject Range
gi\|54302319, gi\|... - gi\|54302319\|ref\|YP_132312.1\| molybdenum cofactor biosynthesis protein [Photobacterium profundum SS9]...	191.0	[0..5]	[178..3]
gi\|90414003, gi\|... - gi\|90414003\|ref\|ZP_01221987.1\| putative molybdenum cofactor biosynthesisprotein Mog [Photobacterium ...	190.0	[0..5]	[178..3]
gi\|160873196, gi... - gi\|160873196\|ref\|YP_001552512.1\| molybdenum cofactor biosynthesis protein [Shewanella baltica OS195]... gi\|151363238, gi... - gi\|152998620\|ref\|YP_001364301.1\| molybdenum cofactor biosynthesis protein [Shewanella baltica OS185]... gi\|217971285, gi... - gi\|217971285\|ref\|YP_002356036.1\| molybdenum cofactor biosynthesis protein [Shewanella baltica OS223]... gi\|68541379, gi\|... - gi\|68541379\|ref\|ZP_00581124.1\| Molybdenum cofactor biosynthesis protein [Shewanella baltica OS155], ... gi\|82740951, gi\|... - gi\|82740951\|ref\|ZP_00903683.1\| Molybdopterin binding domain [Shewanella sp. W3-18-1], gi\|82721718\|gb... gi\|113883097, gi... - gi\|82495795\|ref\|ZP_00881368.1\| Molybdopterin binding domain [Shewanella sp. MR-4], gi\|82406100\|gb\|EA... gi\|124510382, gi... - gi\|124546143\|ref\|ZP_01705259.1\| molybdenum cofactor synthesis domain [Shewanella putrefaciens 200], ... gi\|78689060, gi\|... - gi\|78689060\|ref\|ZP_00853725.1\| Molybdopterin binding domain [Shewanella sp. MR-7], gi\|78511460\|gb\|EA... gi\|78506773, gi\|... - gi\|78685395\|ref\|ZP_00850173.1\| Molybdopterin binding domain [Shewanella sp. ANA-3], gi\|78506773\|gb\|E... gi\|146291164, gi... - gi\|77814403\|ref\|ZP_00813663.1\| Molybdenum cofactor biosynthesis protein [Shewanella putrefaciens CN-...	186.0	[0..5]	[177..3]
gi\|34483285 - gi\|34483285\|emb\|CAE10283.1\| MOLYBDENUM COFACTOR BIOSYNTHESIS MOG [Wolinella succinogenes] gi\|34557568 - gi\|34557568\|ref\|NP_907383.1\| molybdenum cofactor biosynthesis protein [Wolinella succinogenes DSM 17...	186.0	[0..6]	[178..2]
gi\|24345433, gi\|... - gi\|24371665\|ref\|NP_715707.1\| molybdenum cofactor biosynthesis protein [Shewanella oneidensis MR-1], ... SO0065 - molybdenum cofactor biosynthesis protein Mog	185.0	[0..5]	[177..3]
gi\|86154387, gi\|... - gi\|86154387\|ref\|ZP_01072555.1\| molybdopterin biosynthesis mog protein [Campylobacter fetus subsp. fe...	185.0	[0..5]	[178..2]
gi\|59481996, gi\|... - gi\|59713748\|ref\|YP_206523.1\| molybdenum cofactor biosynthesis protein [Vibrio fischeri ES114], gi\|59... gi\|197336829, gi... - gi\|197336829\|ref\|YP_002158127.1\| molybdenum cofactor biosynthesis protein [Vibrio fischeri MJ11], gi...	184.0	[0..4]	[177..3]
gi\|108563209, gi... - gi\|108563209\|ref\|YP_627525.1\| molybdenum cofactor biosynthesis protein [Helicobacter pylori HPAG1], ...	184.0	[0..4]	[178..2]
gi\|68547746, gi\|... - gi\|68547746\|ref\|ZP_00587276.1\| Molybdenum cofactor biosynthesis protein [Shewanella amazonensis SB2B...	184.0	[0..1]	[178..1]
gi\|207092014 - gi\|207092014\|ref\|ZP_03239801.1\| molybdenum cofactor biosynthesis protein [Helicobacter pylori HPKX_4... MOG_HELPY - Molybdopterin adenylyltransferase OS=Helicobacter pylori (strain ATCC 700392 / 26695) GN=mog PE=3 SV... MOG_HELPY - Molybdopterin adenylyltransferase OS=Helicobacter pylori GN=mog PE=3 SV=1	184.0	[0..4]	[178..2]

Back

Predicted Domain #1

Region A:
Residues: [1-178]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKKAVIGV VTISDRASKG IYEDISGKAI IDYLKDVIIT PFEVEYRVIP DERDLIEKTL  60
   61 IELADEKGCS LILTTGGTGP APRDVTPEAT EAVCEKMLPG FGELMRQVSL KQVPTAILSR 120
  121 QTAGIRGSCL IVNLPGKPQS IKVCLDAVMP AIPYCIDLIG GAYIDTDPNK VKAFRPKK

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	49.30103
Match:	2pbqA
Description:	No description for 2pbqA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits