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View Structure Prediction Details

Protein: gi|15675923, gi|...
Organism: Streptococcus pyogenes M1 GAS
Length: 223 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15675923, gi|....

Description E-value Query
Range
Subject
Range
gi|56808668 - gi|56808668|ref|ZP_00366392.1| COG1760: L-serine deaminase [Streptococcus pyogenes M49 591]
208.0 [0..1] [223..1]

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Predicted Domain #1
Region A:
Residues: [1-223]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTQKFQSVF DIIGPVMIGP SSSHTAGAVR IGKVVHSIFG DIPDEVTFHL YNSFAKTYRG  60
   61 HGTDKALVAG IMGMGTDNPD IKNSLEIAHQ KGIKIYWDIL KDSNAPHPNT VKISVKKADK 120
  121 TLSVTGVSIG GGNIQVTELN GFSVSLSMNT PTIVTVHKDI PGMIAKVTDI LSSNNINIAT 180
  181 MNVTRESAGE KATMIIEVDS RECQEAANQI AKIPHIYNVN FFD

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.0
Match: 1psdA
Description: Phosphoglycerate dehydrogenase; Phosphoglycerate dehydrogenase, regulatory (C-terminal) domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transferase activity, transferring aldehyde or ketonic groups 2.7207189033055 bayes_pls_golite062009
oxidoreductase activity 1.95477050413 bayes_pls_golite062009
acetolactate synthase activity 1.81856869558384 bayes_pls_golite062009
catalytic activity 1.01569611874813 bayes_pls_golite062009
oxidoreductase activity, acting on CH-OH group of donors 0.771153340292 bayes_pls_golite062009
oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor 0.66554302844944 bayes_pls_golite062009
transferase activity 0.07375530569672 bayes_pls_golite062009
phosphoglycerate dehydrogenase activity 0.0511824933768104 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle