YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|15807160, gi\|...
Organism:	Deinococcus radiodurans R1
Length:	305 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15807160, gi|....

Description	E-value	Query Range	Subject Range
gi\|37200554, gi\|... - gi\|37676014\|ref\|NP_936410.1\| purine nucleoside phosphorylase [Vibrio vulnificus YJ016], gi\|37200554\|...	7.0E-62	[32..301]	[4..274]
DEOD_XENNA - Purine nucleoside phosphorylase DeoD-type OS=Xenorhabdus nematophila (strain ATCC 19061 / DSM 3370 /... DEOD_XENNE - Purine nucleoside phosphorylase deoD-type OS=Xenorhabdus nematophilus GN=deoD PE=3 SV=1	1.0E-60	[67..298]	[2..233]
DEOD_PHOLL - Purine nucleoside phosphorylase deoD-type OS=Photorhabdus luminescens subsp. laumondii GN=deoD PE=3 ... DEOD_PHOLL - Purine nucleoside phosphorylase DeoD-type OS=Photorhabdus luminescens subsp. laumondii (strain DSM 1...	8.0E-60	[67..298]	[2..233]
DEOD_THETN - Purine nucleoside phosphorylase deoD-type OS=Thermoanaerobacter tengcongensis GN=deoD PE=3 SV=1 DEOD_CALS4 - Purine nucleoside phosphorylase DeoD-type OS=Caldanaerobacter subterraneus subsp. tengcongensis (str...	1.0E-59	[67..298]	[1..232]
gi\|242258488, gi... - gi\|242258488\|ref\|ZP_04803284.1\| purine nucleoside phosphorylase [Thermoanaerobacter sp. X513], gi\|24... gi\|241902447, gi... - gi\|241902447\|ref\|ZP_04787181.1\| purine nucleoside phosphorylase [Thermoanaerobacter brockii subsp. f... DEOD_THEPX - Purine nucleoside phosphorylase DeoD-type OS=Thermoanaerobacter sp. (strain X514) GN=deoD PE=3 SV=1 DEOD_THEP3 - Purine nucleoside phosphorylase DeoD-type OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 ...	1.0E-59	[67..299]	[1..233]
gi\|77959706 - gi\|77959706\|ref\|ZP_00823723.1\| COG0813: Purine-nucleoside phosphorylase [Yersinia bercovieri ATCC 43...	2.0E-59	[67..298]	[2..233]
gi\|77973607 - gi\|77973607\|ref\|ZP_00829153.1\| COG0813: Purine-nucleoside phosphorylase [Yersinia frederiksenii ATCC...	3.0E-59	[67..298]	[2..233]
gi\|77977211 - gi\|77977211\|ref\|ZP_00832666.1\| COG0813: Purine-nucleoside phosphorylase [Yersinia intermedia ATCC 29...	4.0E-59	[67..298]	[2..233]
gi\|77960324 - gi\|77960324\|ref\|ZP_00824201.1\| COG0813: Purine-nucleoside phosphorylase [Yersinia mollaretii ATCC 43...	4.0E-59	[67..298]	[2..233]
DEOD_PECAS - Purine nucleoside phosphorylase DeoD-type OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BA... DEOD_ERWCT - Purine nucleoside phosphorylase deoD-type OS=Erwinia carotovora subsp. atroseptica GN=deoD PE=3 SV=1	4.0E-59	[67..298]	[2..233]

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Predicted Domain #1

Region A:
Residues: [1-305]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIGELFGLA HVHEQRPLLH QLLPFGGGDF FHGGSIANPT EKKAGRAANR RKFGRNALRS  60
   61 PDTLRGMSIH LNAEKGQIAE TVLLPGDPLR ARHIAETFLE NPVQHNTVRG MLGFTGTYKG 120
  121 ERVSVQGTGM GIPSCMIYVN ELIQDYGCKN LIRVGTAGSY QEGVHVRDLV LAQAACTDSN 180
  181 INRVRFGERT FAPIADFELL LRAYQIAQER GFSAHVGNIM SSDTFYNDNP TEFQRWAEFG 240
  241 VLAVEMEAAG LYTLAAKYGV RALTILTISD HLVTHEVTSA EERQLTFNGM IEVALDAALG 300
  301 LEKKA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	59.522879
Match:	2ac7A
Description:	No description for 2ac7A was found.

Predicted functions:

Term	Confidence	Notes
purine-nucleoside phosphorylase activity	3.68206997938506	bayes_pls_golite062009
transferase activity, transferring glycosyl groups	3.66765825367784	bayes_pls_golite062009
catalytic activity	2.18268586151113	bayes_pls_golite062009
transferase activity, transferring pentosyl groups	2.01261001022129	bayes_pls_golite062009
S-methyl-5-thioadenosine phosphorylase activity	1.6959166270803	bayes_pls_golite062009
transferase activity	1.42022417161912	bayes_pls_golite062009
nucleobase binding	1.33291775180025	bayes_pls_golite062009
nucleoside binding	1.11256863177576	bayes_pls_golite062009
purine binding	1.00226077276304	bayes_pls_golite062009
binding	0.192121943858605	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: