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View Structure Prediction Details

Protein: ARP5_ARATH
Organism: Arabidopsis thaliana
Length: 590 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for ARP5_ARATH.

Predicted Domain #1
Region A:
Residues: [1-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAELLFETYG VPAVAFGVDA AFSYKYNQLH GICKKDGIVL CPGFTTTHSI PFVDGEPIYK  60
   61 GSSRTNIGGY HVTDYLKQLL SLKYPFHSSR FTWEKAEDLK LEHCYIAPDY ASEIRLFQEG 120
  121 RKEAEEKTSY WQLPWIPPPT EVPPSEEEIA RKAAIREKQG QRLREMAEAK RVSKINDMEN 180
  181 QLISLRFLLK QVDQVEEDDI PTFLSDTGYA SRQELESTIT KVTQSLRKAR 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.39794
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [231-590]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GEPKNEPAEY EENPDSLNNE KYPLMNVPDD ILTPEQLKDK KRQMFLKTTA EGRLRARQKR  60
   61 NEEELEKEKR NQLEEERRRE NPESYLEELQ AQYKEVLERV EQKKRLKTNG SSNGNNKSGG 120
  121 IGRGERLSAA QRERMRLLTT AAFDRGKGED TFGSRDEDWQ LYKLMSKDND DDDEQPDSDE 180
  181 AELARLSSRL QEIDPTFVQK VEGELSQTSG EVPRVRPLTE EDYKIVIGIE RFRCPEILFH 240
  241 PNLIGIDQVG LDEMAGTSIR RLPHDEKELE ERLTSSILMT GGCSLLPGMN ERLECGIRMI 300
  301 RPCGSPINVV RAMDPVLDAW RGASAFAANL NFLGNAFTKM DYDEKGEDWL RNYQIRYNYL 360
  361 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 101.0
Match: 2oanA
Description: No description for 2oanA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle