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View Structure Prediction Details

Protein: gi|16119821, gi|...
Organism: Agrobacterium tumefaciens str. C58
Length: 221 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16119821, gi|....

Description E-value Query
Range
Subject
Range
gi|6498354, gi|1... - gi|6498354|dbj|BAA87806.1| tiorf181 [Agrobacterium tumefaciens], gi|10955001|ref|NP_053421.1| hypoth...
329.0 [0..1] [221..1]
gi|1814317 - gi|1814317|gb|AAB41867.1| 5 [Agrobacterium vitis]
291.0 [0..1] [217..1]
gi|17744023, gi|... - gi|17939142|ref|NP_536127.1| gene 5 protein [Agrobacterium tumefaciens str. C58], gi|17744023|gb|AAL...
gi|25302602 - pir||AG3228 gene 5 protein [imported] - Agrobacterium tumefaciens (strain C58, Dupont) plasmid Ti
258.0 [0..49] [221..1]
ROB2_AGRRH - Protein-tyrosine phosphatase RolB OS=Agrobacterium rhizogenes GN=rolB PE=4 SV=1
219.0 [0..7] [205..10]

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Predicted Domain #1
Region A:
Residues: [1-221]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYHSRPIFNI IDSSNIQDRR ELKLVLRHTE IAYRSFAQED LIPAQRSWMN SIINTDVPID  60
   61 PAIDEVVKRF CEVACLPGPA GIPLNIILND SLTYVYCSFQ AMRKYAHKRF YDGVSDEGVV 120
  121 ISTVPPYAEG ITKETMRSWH NNVCQNTSNE THDLDAYIAF LPTSLQNPSF SHMKIGCDSF 180
  181 LAPSRVDPFC VEIIAVGKAL FHDNGLKKNP RCGGQWLPPS C

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 77.124939
Match: PF02027.8
Description: No description for PF02027.8 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle