YRC Public Data Repository - Protein Structure Prediction

Protein:	GLRX4_PASMU
Organism:	Pasteurella multocida subsp. multocida str. Pm70
Length:	109 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLRX4_PASMU.

Description	E-value	Query Range	Subject Range
gi\|32030017, gi\|... - gi\|32030017\|ref\|ZP_00132945.1\| COG0278: Glutaredoxin-related protein [Haemophilus somnus 2336], gi\|1...	147.0	[0..1]	[108..1]
gi\|112823220, gi... - gi\|23467039\|ref\|ZP_00122624.1\| COG0278: Glutaredoxin-related protein [Haemophilus somnus 129PT], gi\|...	146.0	[0..1]	[108..1]
gi\|77360159, gi\|... - gi\|77360159\|ref\|YP_339734.1\| hypothetical protein PSHAa1216 [Pseudoalteromonas haloplanktis TAC125],...	145.0	[0..1]	[108..1]
gi\|53732469 - gi\|53732469\|ref\|ZP_00154429.2\| COG0278: Glutaredoxin-related protein [Haemophilus influenzae R2846]	144.0	[0..1]	[106..1]
gi\|238716508, gi... - gi\|77959190\|ref\|ZP_00823212.1\| COG0278: Glutaredoxin-related protein [Yersinia bercovieri ATCC 43970... gi\|77961719, gi\|... - gi\|77961719\|ref\|ZP_00825551.1\| COG0278: Glutaredoxin-related protein [Yersinia mollaretii ATCC 43969...	143.0	[0..1]	[109..1]
gi\|46133323 - gi\|46133323\|ref\|ZP_00157004.2\| COG0278: Glutaredoxin-related protein [Haemophilus influenzae R2866]	142.0	[0..1]	[106..1]
gi\|162354157, gi... - gi\|77633720\|ref\|ZP_00795839.1\| COG0278: Glutaredoxin-related protein [Yersinia pestis Angola], gi\|16... gi\|152959757, gi... - gi\|77629368\|ref\|ZP_00791954.1\| COG0278: Glutaredoxin-related protein [Yersinia pseudotuberculosis IP... gi\|167422119, gi... - gi\|167422119\|ref\|ZP_02313872.1\| monothiol glutaredoxin GrxD [Yersinia pestis biovar Orientalis str. ... gi\|167056072, gi... - gi\|167424885\|ref\|ZP_02316638.1\| monothiol glutaredoxin GrxD [Yersinia pestis biovar Mediaevalis str.... gi\|167469391 - gi\|167469391\|ref\|ZP_02334095.1\| monothiol glutaredoxin GrxD [Yersinia pestis FV-1] gi\|170024105, gi... - gi\|170024105\|ref\|YP_001720610.1\| hypothetical protein YPK_1866 [Yersinia pseudotuberculosis YPIII], ... gi\|186698702, gi... - gi\|186895676\|ref\|YP_001872788.1\| hypothetical protein YPTS_2370 [Yersinia pseudotuberculosis PB1/+],... gi\|51589903, gi\|... - gi\|51596621\|ref\|YP_070812.1\| hypothetical protein YPTB2297 [Yersinia pseudotuberculosis IP 32953], g... Q66A35\|Q66A35_YERPS - Putative uncharacterized protein - Yersinia pseudotuberculosis gi\|25318358 - pir\|\|AH0290 conserved hypothetical protein YPO2383 [imported] - Yersinia pestis (strain CO92) gi\|229898471, gi... - gi\|229898471\|ref\|ZP_04513617.1\| monothiol glutaredoxin [Yersinia pestis biovar Orientalis str. India... gi\|16122606, gi\|... - gi\|218929474\|ref\|YP_002347349.1\| hypothetical protein YPO2383 [Yersinia pestis CO92], gi\|16122606\|re... gi\|229701957, gi... - gi\|229895069\|ref\|ZP_04510246.1\| monothiol glutaredoxin [Yersinia pestis Pestoides A], gi\|229701957\|g... gi\|165913513, gi... - gi\|89103796\|ref\|ZP_01176360.1\| COG0278: Glutaredoxin-related protein [Yersinia pestis biovar Orienta... gi\|165926467, gi... - gi\|165926467\|ref\|ZP_02222299.1\| monothiol glutaredoxin GrxD [Yersinia pestis biovar Orientalis str. ... gi\|229837908, gi... - gi\|229837908\|ref\|ZP_04458067.1\| monothiol glutaredoxin [Yersinia pestis biovar Orientalis str. PEXU2... gi\|108779637, gi... - gi\|108807724\|ref\|YP_651640.1\| hypothetical protein YPA_1729 [Yersinia pestis Antiqua], gi\|108779637\|... gi\|166010638, gi... - gi\|166010638\|ref\|ZP_02231536.1\| monothiol glutaredoxin GrxD [Yersinia pestis biovar Antiqua str. E19... gi\|229902311, gi... - gi\|229902311\|ref\|ZP_04517431.1\| monothiol glutaredoxin [Yersinia pestis Nepal516], gi\|229680646\|gb\|E... gi\|166210851, gi... - gi\|166210851\|ref\|ZP_02236886.1\| monothiol glutaredoxin GrxD [Yersinia pestis biovar Antiqua str. B42... gi\|167400819, gi... - gi\|167400819\|ref\|ZP_02306325.1\| monothiol glutaredoxin GrxD [Yersinia pestis biovar Antiqua str. UG0... gi\|145209762, gi... - gi\|145598066\|ref\|YP_001162142.1\| hypothetical protein YPDSF_0763 [Yersinia pestis Pestoides F], gi\|1... gi\|149292119, gi... - gi\|149365706\|ref\|ZP_01887741.1\| hypothetical protein YPE_0880 [Yersinia pestis CA88-4125], gi\|149292...	142.0	[0..1]	[109..1]
gi\|68249713, gi\|... - gi\|68249713\|ref\|YP_248825.1\| glutaredoxin-related protein [Haemophilus influenzae 86-028NP], gi\|6805...	142.0	[0..1]	[106..14]
gi\|84779938, gi\|... - gi\|85059418\|ref\|YP_455120.1\| hypothetical protein SG1440 [Sodalis glossinidius str. 'morsitans'], gi...	141.0	[0..3]	[109..4]
gi\|77979563, gi\|... - gi\|77979563\|ref\|ZP_00834981.1\| COG0278: Glutaredoxin-related protein [Yersinia intermedia ATCC 29909...	141.0	[0..1]	[108..1]

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Predicted Domain #1

Region A:
Residues: [1-109]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METLDKIKKQ ISENPILIYM KGSPKFPSCG FSARAVEALM HCKVPFGYVD ILQHPDIRAE  60
   61 LPAYANWPTF PQLWVDGELV GGCDIILEMF QQGELQTLLA DVAAKYPQE

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	34.0
Match:	1ykaA
Description:	Solution structure of Grx4, a monothiol glutaredoxin from E. coli.
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits