| Protein: | nhr-31 |
| Organism: | Caenorhabditis elegans |
| Length: | 544 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nhr-31.
| Description | E-value | Query Range |
Subject Range |
|
|
379.0 | [0..1] | [544..52] |
|
Region A: Residues: [1-134] |
1 11 21 31 41 51
| | | | | |
1 MRGDLRTSGA TSSSGPATSY IIRPSDKQPT VSSGGSQNGD SVCAVCGDGI AKLHYGVLAC 60
61 YGCKGFFRRT LTGKYRYACR FSNNCIVDKF QRNSCRYCRF QRCIQAGMDP KAVRPDRDQT 120
121 GKQKVPRIKK KQID
|
| Detection Method: |  |
| Confidence: | 27.39794 |
| Match: | 2a66A |
| Description: | Human Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 Promoter |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [135-428] |
1 11 21 31 41 51
| | | | | |
1 EELLNHMMRL QGDDWSRKLP VETRILLMQL MSIEDKVVKG DNNMSAQNTA KDPKSISLRE 60
61 MFESKPALDG RRMEIGYEPF RMARTEELGV IAHRRAIAAV DWVDSLTEIA DAVDTEDKVA 120
121 LVKSCYSPLT IFNFSARTAQ NTKNPDILCL CSHSFVPRRL PPEFNETNHL SNFLIDRTLN 180
181 ELVAPLRKLN LKEEEIVPLK AIIILNPNAK GLSEHARHAI SELRDKVQDM LFQIVKELHP 240
241 IYSASSRFGN LLLLLPTITT LSGLMSENMH FCQALGGRAS GDNLLAEMFG DRTF
|
| Detection Method: | |
| Confidence: | 42.39794 |
| Match: | 2gl8A |
| Description: | No description for 2gl8A was found. |
|
Region A: Residues: [429-544] |
1 11 21 31 41 51
| | | | | |
1 DDQLISSSIS PPLFENPAEI CLESISPPMS DRRFVRRVDV ATQTNDDLLS SGPYLPHSNS 60
61 CSSMLNAGYS PPMLSTSPFP LLDDNDSAFQ NDISLTELNG CEEFFSQLMD QPIIDS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
