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View Structure Prediction Details

Protein: gi|34365703, gi|...
Organism: Arabidopsis thaliana
Length: 395 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|34365703, gi|....

Description E-value Query
Range
Subject
Range
gi|4325376, gi|7... - gi|7267536|emb|CAB78018.1| hypothetical protein [Arabidopsis thaliana], gi|4325376|gb|AAD17372.1| T3...
476.0 [0..1] [395..1]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWLRFFSRT LKSLPQISSS SPNPNPNFRT SPFSTSFLIT KTPDKLKKKR KKPESARTKS  60
   61 IQHESTKLPH LESLVSRDAH FRFLIRSKEF ISKQPERILR LDDAGKLYRE LGFPRGRKVT 120
  121 KFIPKHPLIF QTYRHSDGKI WLGFTEFMED LLDEEKGLME SMELDRVNCV RKLLMMTKDK 180
  181 RILLSKIHHT RLLFGIPEDF RDRVAKYPDY FRVVTGGDGN RVLELVNWDT NLAVSELERL 240
  241 FMIDEDKAKR VFKFPVKHG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [260-395]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KELELEEKDT RKLNLLNTFP LVSPYSDGWK LDVWSLEAEK YRVGIVHEFL NLTLEKRASI  60
   61 HHIVEFKDEF SLTRQTYQML KKQSMSFYLA GTEMNWTVFL KDAYDENGVL VSKDPQVVFN 120
  121 EKLYKYADMQ QMEQVG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle