| Protein: | gi|55167900, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 388 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|55167900, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
316.0 | [0..3] | [388..8] |
|
Region A: Residues: [1-388] |
1 11 21 31 41 51
| | | | | |
1 MHSSLLIVLL FLLSVSSSSA QTYNILSYGA KPDGKTDSTK AFTVLWAKAC ASVKPVTILV 60
61 PKGRFLLRSI IFDGSKCKRK SVTFRIQGTL VAPSDYRVIG KENYWILFQH LDGISVYGGV 120
121 LDAQGASLWS CKKSGKNCPS GATSIGFQSS RNVVISGLTS LNSQMFHVAI NGCSNVKLDG 180
181 VKVSADGNSP NTDGIHVQSS STVSILNSKI STGDDCVSIG PGTNGLWIEN VACGPGHGIS 240
241 IGSLGKESVE VGVQNITVKT ATFTGTENGV RIKSWARPSN GFAKNIRFQH CVMNNVQNPI 300
301 VIDQNYCPGN ENCPNQVSGI KISDVMFFDI HGTSATEVGV KLDCSSKKPC TGIRIQDVKL 360
361 TYRNKPATTD CSHAGGSEAG FQRPNSCL
|
| Detection Method: |  |
| Confidence: | 42.69897 |
| Match: | 1rmgA |
| Description: | RHAMNOGALACTURONASE A FROM ASPERGILLUS ACULEATUS |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| polygalacturonase activity | 3.63113788404352 | bayes_pls_golite062009 |
| catalytic activity | 0.67288476528593 | bayes_pls_golite062009 |
| hydrolase activity | 0.329563804802467 | bayes_pls_golite062009 |
