YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|52306810, gi|...
Organism: Mannheimia succiniciproducens MBEL55E
Length: 136 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52306810, gi|....

Description E-value Query
Range
Subject
Range
gi|150841188, gi... - gi|75431428|ref|ZP_00733000.1| Lactoylglutathione lyase [Actinobacillus succinogenes 130Z], gi|74276...
136.0 [0..2] [136..1]

Back

Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMRILHTMLR VGDLDRSVKF YQDVLGMRLL RTSENPEYKY SLAFLGYDDE DKTAVIELTY  60
   61 NWGVTEYELG SAFGHIAIGV DDIHATCEAV KAHGGKVTRE PGPVKGGSTV IAFVEDPDGY 120
  121 KIEFIENKNA KAALGN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 31.69897
Match: 1f9zA
Description: Glyoxalase I (lactoylglutathione lyase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
lactoylglutathione lyase activity 3.91334658149719 bayes_pls_golite062009
carbon-sulfur lyase activity 1.44168339433372 bayes_pls_golite062009
catalytic activity 1.21778090213032 bayes_pls_golite062009
binding 1.0454158969791 bayes_pls_golite062009
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen 0.397354910065381 bayes_pls_golite062009
oxidoreductase activity, acting on single donors with incorporation of molecular oxygen 0.343093696737896 bayes_pls_golite062009
protein binding 0.28912087714501 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle