| Protein: | gi|52306853, gi|... |
| Organism: | Mannheimia succiniciproducens MBEL55E |
| Length: | 298 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52306853, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
234.0 | [0..7] | [298..22] |
|
Region A: Residues: [1-298] |
1 11 21 31 41 51
| | | | | |
1 MMKDSALIEL FLNELWLGKG LSDNTVQSYR LDLTALSQWL QGQGKSLETL DSSDLQAFLG 60
61 ERVDQGYKAT STARMLSAMR KLFQYLYQES YRTDDPSAIL SSPKLPGRLP KYLTEQQVGD 120
121 LLNAPSTDIP LELRDKAMLE LLYATGLRVT ELVTLSTDNI NLEQGVVRVI GKGNKERIVP 180
181 MGEEASYWVG QFILYGRPML LNGQSSDVIF PSKRALQMTR QTFWHRIKHY AILADIDTDS 240
241 LSPHVLRHAF ATHLVNHGAD LRVVQMLLGH SDLSTTQIYT HVAKERLKRL HEKYHPRG
|
| Detection Method: |  |
| Confidence: | 56.522879 |
| Match: | 1a0pA |
| Description: | SITE-SPECIFIC RECOMBINASE, XERD |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| site-specific recombinase activity | 4.99325011803106 | bayes_pls_golite062009 |
| integrase activity | 3.60695091575172 | bayes_pls_golite062009 |
| catalytic activity | 2.22520758916604 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.11292854906722 | bayes_pls_golite062009 |
| DNA binding | 0.10970863758177 | bayes_pls_golite062009 |
| nucleic acid binding | 0.06580979261817 | bayes_pls_golite062009 |
