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View Structure Prediction Details

Protein: gi|53716289, gi|...
Organism: Burkholderia mallei ATCC 23344
Length: 142 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|53716289, gi|....

Description E-value Query
Range
Subject
Range
gi|170733561, gi... - gi|170733561|ref|YP_001765508.1| biopolymer transport protein ExbD/TolR [Burkholderia cenocepacia MC...
gi|84355174, gi|... - gi|84355174|ref|ZP_00980063.1| COG0848: Biopolymer transport protein [Burkholderia cenocepacia PC184...
gi|206560653, gi... - gi|206560653|ref|YP_002231418.1| putative biopolymer transport protein [Burkholderia cenocepacia J23...
169.0 [0..1] [142..1]

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Predicted Domain #1
Region A:
Residues: [1-142]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMNTSFGDD DDDGLMNEIN MTPLVDVMLV LLIIFLVTIP AMHHAVKIDL PRASSQPVEV  60
   61 KPKTIDVAIE SDGTVLWDDH PVSAADLQAR IAQAAQTNPQ PELHLRADRK VAYERVAEVM 120
  121 SAAQAGGLTK LGFVTEPKSN AK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 21.387216
Match: PF02472.7
Description: No description for PF02472.7 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.745 N/A N/A c.46.1 Rhodanese/Cell cycle control phosphatase
View Download 0.741 N/A N/A c.102.1 Cell-division inhibitor MinC, N-terminal domain
View Download 0.741 N/A N/A c.46.1 Rhodanese/Cell cycle control phosphatase
View Download 0.733 N/A N/A c.102.1 Cell-division inhibitor MinC, N-terminal domain
View Download 0.700 N/A N/A c.102.1 Cell-division inhibitor MinC, N-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle