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View Structure Prediction Details

Protein: gi|52214354, gi|...
Organism: Bacteroides fragilis YCH46
Length: 278 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|52214354, gi|....

Description E-value Query
Range
Subject
Range
gi|60491192, gi|... - gi|60679758|ref|YP_209902.1| putative haloacid dehalogenase-like hydrolase [Bacteroides fragilis NCT...
197.0 [0..1] [277..1]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKYKLLVLDL DGTLTNAKKE ITLRNREALI HAQEQGVKLI LASGRPTFGI APLADELRMK  60
   61 EFGGFILSYN GGEIIDWSTG EIVYANVLPD KVIPRLYECA TRNQLPILTY DHQYIITEYP 120
  121 DDDYVRKEAF LNKMQIYPST DFLKDIRLPL PKCLIVGEPH RLIPIEAELS VELQGQLSVY 180
  181 RSEPFFLELV PQGIDKAQSL SVLLNKLNMN REEIVAVGDG YNDLSMIQFA GLGVAMGNAQ 240
  241 EPVKKAADYI TLSNEEDGVA AVVNKFFTKA PEKGETTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 43.221849
Match: 1rkqA
Description: Crystal structure of NYSGRC target T1436: A Hypothetical protein yidA.
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.55296860681783 bayes_pls_golite062009
hydrolase activity 0.996930438913923 bayes_pls_golite062009
phosphatase activity 0.0985887286442809 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.0342238658800214 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle