YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|46916730, gi|...
Organism: Photobacterium profundum SS9
Length: 156 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46916730, gi|....

Description E-value Query
Range
Subject
Range
gi|254252488, gi... - gi|84361653|ref|ZP_00986308.1| COG4702: Uncharacterized conserved protein [Burkholderia dolosa AUO15...
230.0 [0..4] [152..6]

Back

Predicted Domain #1
Region A:
Residues: [1-156]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIIDLATLLE QEQELQFTDF DYESAWELGS LLRHNATKRN ASVAIDITLN GHCLFSSAMP  60
   61 DTSIDNIEWI KRKKNVVHRY QHSSWYMGQY YKTKGKNITE ASLVDATQFA PYGGSFPLTI 120
  121 KGVDVVGSIT VSGLPQYEDH LMVVETLSEF IQRYQK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 6.57
Match: 2a2lA
Description: Crystal structure of Klebsiella pneumoniae hypothetical protein ORFY, New York Structural Genomics Consortium
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle