| Protein: | RL3_PHOPR |
| Organism: | Photobacterium profundum SS9 |
| Length: | 209 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RL3_PHOPR.
| Description | E-value | Query Range |
Subject Range |
|
|
306.0 | [0..1] | [209..1] |
|
Region A: Residues: [1-209] |
1 11 21 31 41 51
| | | | | |
1 MIGLIGRKVG MTRIFTEEGI SIPVTVVEVE ANRVTQVKSL ETDGYNAIQI TTGTKKANRV 60
61 SKPAAGHFAK AGVEAGRGLW EFRLENGEEF AVGAELNVEL FNEVKKVDVT GTSKGKGFQG 120
121 VIKRWNFSTQ DMTHGNSLSH RAPGSIGQCQ TPGRVFKGKK MAGHMGAERV TTQNLEIVRV 180
181 DAERNLLLIK GAVPGSIGGN VIVKPAVKA
|
| Detection Method: |  |
| Confidence: | 80.221849 |
| Match: | 1p85B |
| Description: | 70S ribosome functional complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 8.74976995123472 | bayes_pls_golite062009 |
| structural molecule activity | 8.17182185344538 | bayes_pls_golite062009 |
| translation initiation factor activity | 2.68619850021832 | bayes_pls_golite062009 |
| translation regulator activity | 2.20347076721097 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 2.18748808024313 | bayes_pls_golite062009 |
| nucleic acid binding | 1.73237871506838 | bayes_pls_golite062009 |
| binding | 1.44145316612405 | bayes_pls_golite062009 |
| peptidyltransferase activity | 1.25473146071242 | bayes_pls_golite062009 |
| RNA binding | 0.798696391797967 | bayes_pls_golite062009 |
| protein binding | 0.449435758237719 | bayes_pls_golite062009 |
