| Protein: | gi|54308009, gi|... |
| Organism: | Photobacterium profundum SS9 |
| Length: | 291 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54308009, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
329.0 | [0..17] | [291..15] |
|
Region A: Residues: [1-291] |
1 11 21 31 41 51
| | | | | |
1 MRKSLVALSV LAATALPAVV SAADYSDDIH KNDYNWMQFN LMYAVNELPG ESDHDYLEME 60
61 FGGRSGIFDL YGYVDVFNLT NSKSSDKNGE PKIFMKFAPR ISLDAVTGKD LSFGPVQELY 120
121 IATVFEYGGD AGYTGVLTNG DGTAQLDSDG KPQYGAAKGP NNAKVGLGSD VMVPWFGKVG 180
181 LNLYGFYDMN EKDWNGYQIS TNWFKPFHFF DNGSFISYQG YIDYQFGMNN DVPGLTSSNG 240
241 GAMFNGLYWH SDQFAVGYGL KGYKEIYGLK DGGFAGKTTG IAHYFDVTYK F
|
| Detection Method: |  |
| Confidence: | 59.69897 |
| Match: | 1tlwA |
| Description: | Tsx structure complexed with thymidine |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| nucleoside transmembrane transporter activity | 10.4297934011355 | bayes_pls_golite062009 |
| nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity | 5.73088734190731 | bayes_pls_golite062009 |
| transporter activity | 2.55928656852707 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.44072409024655 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.14215782778459 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 2.06465400776497 | bayes_pls_golite062009 |
