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View Structure Prediction Details

Protein: gi|54308124, gi|...
Organism: Photobacterium profundum SS9
Length: 129 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|54308124, gi|....

Description E-value Query
Range
Subject
Range
gi|90328244, gi|... - gi|90411031|ref|ZP_01219045.1| flagellar motor switch protein [Photobacterium profundum 3TCK], gi|90...
134.0 [0..1] [129..1]

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Predicted Domain #1
Region A:
Residues: [1-129]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQNDQQMAD DWAAALAEQT VDGAQPAPLE ELVDESTPIS DDERRKLDTI MDIPVTISME  60
   61 VGRTQISIRN LLQLNQGSVV ELDRIAGEPL DVMVNGTLIA HGEVVVVNDK FGIRLTDVIS 120
  121 QTERIKKLR

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Detection Method: PSI-BLAST
Confidence: 20.39794
Match: 1o6aA
Description: Crystal structure of the c-terminal fragment of the putative flagelar motor switch protein FliN (TM0680a) from Thermotoga maritima at 1.85 A resolution
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
motor activity 3.07201707618408 bayes_pls_golite062009
nucleoside-triphosphatase activity 1.17271522721174 bayes_pls_golite062009
pyrophosphatase activity 1.12849207458848 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 1.10878539079436 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 1.10781034885807 bayes_pls_golite062009
binding 0.851616221377121 bayes_pls_golite062009
hydrolase activity 0.325371951256 bayes_pls_golite062009
protein binding 0.253452523212299 bayes_pls_golite062009
catalytic activity 0.145477743192426 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle