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View Structure Prediction Details

Protein: CCME_PHOPR
Organism: Photobacterium profundum SS9
Length: 161 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCME_PHOPR.

Description E-value Query
Range
Subject
Range
gi|91223575, gi|... - gi|91223575|ref|ZP_01258840.1| cytochrome c-type biogenesis protein CcmE [Vibrio alginolyticus 12G01...
gi|75854960, gi|... - gi|75854960|ref|ZP_00762627.1| COG2332: Cytochrome c-type biogenesis protein CcmE [Vibrio sp. Ex25],...
244.0 [0..1] [161..1]

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Predicted Domain #1
Region A:
Residues: [1-161]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPRRKKRLT LAVALVFGLG ATIGLMLYAL SQNMDLFYTP TELVQGKPDG TKPEVGQRLR  60
   61 IGGMVVEGSV KRDPQSLIVT FEVADVGPAV TITYNGILPD LFREGQGIVA QGVLVNSTTI 120
  121 EAHEVLAKHD EEYMPPEIAE AMKKTHEPLQ YSDEQKQGRV Q

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 46.39794
Match: 1j6qA
Description: Heme chaperone CcmE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.44742917397369 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle