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View Structure Prediction Details

Protein: gi|46912791, gi|...
Organism: Photobacterium profundum SS9
Length: 248 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46912791, gi|....

Description E-value Query
Range
Subject
Range
UCK1_DANRE - Uridine-cytidine kinase 1 OS=Danio rerio GN=uck1 PE=2 SV=1
211.0 [0..38] [246..13]

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Predicted Domain #1
Region A:
Residues: [1-248]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLEVTFSLAS GAASAYNNAV NFSPRHVVLQ VLSDMSENSH QCVIIGIAGA SASGKSLIAS  60
   61 TVYKELKEKV GDHQIGVITE DCYYNNQSHL TMDERVKTNY DHPNALDHNL LCDHLQRLIE 120
  121 GKAVEVPQYS YSEHTRLKET TPMTPKKVII LEGILLLTDP RLRELMHASV FMDTPLDICL 180
  181 LRRLQRDVAE RGRTMESVLV QYQKTVRPMF MQFIEPSKQY ADIIVPRGGK NRIAIDVLKA 240
  241 HIAKLLKS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.522879
Match: 1udwA
Description: Crystal structure of human uridine-cytidine kinase 2 complexed with a feedback-inhibitor, CTP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
nucleobase, nucleoside, nucleotide kinase activity 3.31021342806183 bayes_pls_golite062009
nucleotide kinase activity 2.24094813695083 bayes_pls_golite062009
phosphotransferase activity, phosphate group as acceptor 1.96697952975573 bayes_pls_golite062009
kinase activity 1.60827037072506 bayes_pls_golite062009
binding 1.25659194713805 bayes_pls_golite062009
catalytic activity 1.00104173493322 bayes_pls_golite062009
hydrolase activity 0.420858111948277 bayes_pls_golite062009
adenylate kinase activity 0.373057703057608 bayes_pls_golite062009
nucleic acid binding 0.216266069700019 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle