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View Structure Prediction Details

Protein: gi|46913056, gi|...
Organism: Photobacterium profundum SS9
Length: 267 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46913056, gi|....

Description E-value Query
Range
Subject
Range
gi|90411819, gi|... - gi|90411819|ref|ZP_01219828.1| hypothetical Ap4A phosphorylase II [Photobacterium profundum 3TCK], g...
382.0 [0..1] [267..1]

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Predicted Domain #1
Region A:
Residues: [1-267]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFWKKAEKVV EQALVNNSLL PITTEACVIN EAGIDYFGHV VTQNAERKFQ SGTKQDNPFL  60
   61 PYEEDMFVDN AGESHVCLLN KFPVLSPHLL ICSREFVPQT SPLELQDFCA WVMGFDSDNV 120
  121 LGFYNSGTIA GASQAHRHMQ LVQSSIPLEH AIINHELPFK HHLYQFDSLS GERLYLCYLA 180
  181 GLRELGILDK NGLTNDNSLP SEQECKPYNL LLTKHWMLMI PRSTNQINDV FANGINYSGR 240
  241 FLVKEPEQLA WLKEYGMMQF LKDCSQG

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 3.97
Match: 1y23A
Description: Crystal structure of a member of HIT family of proteins from bacillus subtilis
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle