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View Structure Prediction Details

Protein: gi|46914015, gi|...
Organism: Photobacterium profundum SS9
Length: 199 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46914015, gi|....

Description E-value Query
Range
Subject
Range
gi|90413084, gi|... - gi|90413084|ref|ZP_01221081.1| Hypothetical MutT/nudix family protein [Photobacterium profundum 3TCK...
163.0 [0..1] [199..1]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISQQQILSR FMLAPTTDYD KSHNERVRQH VSATDTFKPA AVLIPLVPRN NTYNVVLTRR  60
   61 ANHLKHHPGQ IAFPGGRHES FDQDLAATAL RETEEETGIL CSRNHILGQL PALPTISGYM 120
  121 VTPFLSTIAA DYQPKLDPSE VDELFEVPIQ YLLNPVNMRS QQFQINGHLH NIYSIPFSNY 180
  181 SIWGATAQMI KLLSKQLWY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 24.69897
Match: 1nqyA
Description: Coenzyme A pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.49075808737475 bayes_pls_golite062009
hydrolase activity 1.0879699007552 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides 0.859040726089354 bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides 0.859001295204634 bayes_pls_golite062009
binding 0.375648815718136 bayes_pls_golite062009
pyrophosphatase activity 0.231401568856773 bayes_pls_golite062009
nucleic acid binding 0.0715631252684563 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle