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View Structure Prediction Details

Protein: gi|46914021, gi|...
Organism: Photobacterium profundum SS9
Length: 243 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46914021, gi|....

Description E-value Query
Range
Subject
Range
gi|194541372, gi... - gi|75855076|ref|ZP_00762739.1| COG0778: Nitroreductase [Vibrio sp. Ex25], gi|254227315|ref|ZP_049207...
246.0 [0..3] [243..1]

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Predicted Domain #1
Region A:
Residues: [1-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMNQTIDTI LQHRSIRQFT DQAIDAELLS SLLDCAIAAS TSSFIQCVSI IRVTQSDTRQ  60
   61 KLAHLAGGQP YVETAAEFLV FCADFNRHQQ IHPEAQLGFT EQTLIGAVDA ALMAQNCLIA 120
  121 AESMGLGGVY IGGLRNNPEA VADVLALPQH VIPLFGLCLG YPSQNPEIKP RLPQSIIVHQ 180
  181 EQYQQVLNQP ELQNYDEEVR EYYRTRTGGN KEMSWSEQIT DALNKEARPF MKGFINSKGF 240
  241 STK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.221849
Match: 1bkjA
Description: Flavin reductase P (NADPH:FMN oxidoreductase)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.48193963005483 bayes_pls_golite062009
oxidoreductase activity 0.480695441264854 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle