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View Structure Prediction Details

Protein: gi|46914033, gi|...
Organism: Photobacterium profundum SS9
Length: 284 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46914033, gi|....

Description E-value Query
Range
Subject
Range
gi|90413064, gi|... - gi|90413064|ref|ZP_01221061.1| putative transcriptional regulator [Photobacterium profundum 3TCK], g...
231.0 [0..1] [284..1]

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Predicted Domain #1
Region A:
Residues: [1-284]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLEKVQKN LDNFSKSERK VAEVIIASPQ TAIHSSIATL AKMADVSEPT VNRFCRRLDT  60
   61 KGFPDFKLHL AQSLANGTPY VNRNVEEDDS PDAYTSKIFE STMACLDVAK NSLDPVQINR 120
  121 SVDLLTQAKK ISFFGLGASA SVAHDAQNKF FRFNIPIVCF DDIIMQRMSV INCSDGDVVV 180
  181 MISHTGRTKS LVDIARIARE NGATVIGITA KDSPLDRECS LSICLDVPED TDIYMPMASR 240
  241 VVQMTVIDVL ATGFTLRRGS GFRENLKRVK ESLKDSRFSK ENIL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 47.0
Match: 1jxaA
Description: "Isomerase domain" of glucosamine 6-phosphate synthase (GLMS); Glucosamine 6-phosphate synthase, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.5278037255884 bayes_pls_golite062009
binding 0.570536202654476 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle