YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|46914409, gi\|...
Organism:	Photobacterium profundum SS9
Length:	246 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|46914409, gi|....

Description	E-value	Query Range	Subject Range
gi\|11288326 - pir\|\|A82418 arylesterase VCA0783 [imported] - Vibrio cholerae (strain N16961 serogroup O1) gi\|227015157, gi... - gi\|227119707\|ref\|YP_002821602.1\| arylesterase [Vibrio cholerae O395], gi\|227015157\|gb\|ACP11366.1\| ar... gi\|153823216, gi... - gi\|153823216\|ref\|ZP_01975883.1\| arylesterase [Vibrio cholerae B33], gi\|126519255\|gb\|EAZ76478.1\| aryl... gi\|9658207, gi\|1... - gi\|9658207\|gb\|AAF96681.1\| arylesterase [Vibrio cholerae O1 biovar eltor str. N16961], gi\|15601538\|re... gi\|227011491, gi... - gi\|227812349\|ref\|YP_002812359.1\| arylesterase [Vibrio cholerae M66-2], gi\|227011491\|gb\|ACP07702.1\| a... gi\|124118127, gi... - gi\|153223577\|ref\|ZP_01953955.1\| arylesterase [Vibrio cholerae MAK 757], gi\|124118127\|gb\|EAY36870.1\| ... gi\|121728956, gi... - gi\|121728956\|ref\|ZP_01681961.1\| arylesterase [Vibrio cholerae V52], gi\|121628765\|gb\|EAX61230.1\| aryl... gi\|153820367, gi... - gi\|153820367\|ref\|ZP_01973034.1\| arylesterase [Vibrio cholerae NCTC 8457], gi\|126509091\|gb\|EAZ71685.1... gi\|254849942, gi... - gi\|254849942\|ref\|ZP_05239292.1\| arylesterase [Vibrio cholerae MO10], gi\|254845647\|gb\|EET24061.1\| ary...	204.0	[0..33]	[246..2]

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Predicted Domain #1

Region A:
Residues: [1-246]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAPETPTSA IVSPCSTSRE TSCKMVSEDD AVVTFLDTDT ALITDVDMMR ILSVLLIYLC  60
   61 SLNAWGNTLL VVGDSLSAGY QMRAEQSWPV LLQPALKQQG HEITVVNASI SGDTTGNGLA 120
  121 RLPTLLQQHK PAYVIIELGA NDGLRGFPQG TIRNNLSQMI TEIQNADAKP MLVQIKVPPN 180
  181 YGKRYSDMFS SIYPQLSKEL ATPLLPFFLE QIILKQEWMM NDGLHPKSDA QPWIAEYMAE 240
  241 NIAPYL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	42.39794
Match:	1jrlA
Description:	Thioesterase I, TAP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
hydrolase activity	1.58586737994874	bayes_pls_golite062009
catalytic activity	1.15974340242656	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: