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View Structure Prediction Details

Protein: tr|G3H2T6|G3H2T6...
Organism: Cricetulus griseus
Length: 103 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tr|G3H2T6|G3H2T6....

Description E-value Query
Range		 Subject
Range
gi|74004215 - gi|74004215|ref|XP_853963.1| PREDICTED: similar to germinal histone H4 gene [Canis familiaris]
 2.0E-43 [18..103] [390..475]
gi|76631272 - gi|76631272|ref|XP_608100.2| PREDICTED: similar to germinal histone H4 gene [Bos taurus]
 1.0E-40 [18..103] [231..316]
gi|94378251 - gi|94378251|ref|XP_981474.1| PREDICTED: similar to histone H4 [Mus musculus]
 4.0E-39 [18..103] [73..158]
gi|47225212 - gi|47225212|emb|CAF98839.1| unnamed protein product [Tetraodon nigroviridis]
 9.0E-39 [18..103] [149..234]
gi|50728592 - gi|50728592|ref|XP_416193.1| PREDICTED: similar to histone protein Hist2h3c1 [Gallus gallus]
 3.0E-38 [18..102] [129..213]

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Predicted Domain #1
Region A:
Residues: [1-103] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK  60
   61 VFLENVIRDA VTYTEHAKRK TVTAMDVVYA LKRQGRTLYG FGG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 34.30103
Match: 1eqzD
Description: Histone H4
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.581886805340955 bayes_pls_golite062009
YRC Informatics Platform - Version 3.0
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