YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30264770, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	217 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30264770, gi|....

Description	E-value	Query Range	Subject Range
TRMB_BACWK - tRNA (guanine-N(7)-)-methyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=trmB PE=3 SV... gi\|229062385, gi... - gi\|229062385\|ref\|ZP_04199701.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus AH603], gi\|2... gi\|229013906, gi... - gi\|229013906\|ref\|ZP_04171033.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus mycoides DSM 2048],... gi\|228614037, gi... - gi\|229169432\|ref\|ZP_04297140.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus AH621], gi\|2...	8.0E-41	[1..217]	[1..217]
gi\|228856395, gi... - gi\|228903221\|ref\|ZP_04067354.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis IBL 4... gi\|75761593, gi\|... - gi\|75761593\|ref\|ZP_00741547.1\| tRNA (m(7)G46) methyltransferase [Bacillus thuringiensis serovar isra... TRMB_BACC2 - tRNA (guanine-N(7)-)-methyltransferase OS=Bacillus cereus (strain G9842) GN=trmB PE=3 SV=1 gi\|228941883, gi... - gi\|228941883\|ref\|ZP_04104428.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis serov... gi\|228910556, gi... - gi\|228910556\|ref\|ZP_04074370.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis IBL 2... gi\|228778602, gi... - gi\|228981402\|ref\|ZP_04141702.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis Bt407... gi\|228784908, gi... - gi\|228974810\|ref\|ZP_04135374.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis serov...	1.0E-40	[1..217]	[1..217]
gi\|228728963, gi... - gi\|229032355\|ref\|ZP_04188327.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus AH1271], gi\|... gi\|228771758, gi... - gi\|228987954\|ref\|ZP_04148060.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis serov... gi\|228625268, gi... - gi\|229158310\|ref\|ZP_04286377.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus ATCC 4342], ... gi\|47565124, gi\|... - gi\|47565124\|ref\|ZP_00236167.1\| methyltransferase, putative [Bacillus cereus G9241], gi\|47557910\|gb\|E...	2.0E-40	[1..217]	[1..217]
gi\|228630513, gi... - gi\|229152900\|ref\|ZP_04281082.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus m1550], gi\|2... gi\|228636171, gi... - gi\|229147270\|ref\|ZP_04275621.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus BDRD-ST24], ... gi\|229129980, gi... - gi\|229129980\|ref\|ZP_04258944.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus BDRD-Cer4], ... gi\|228671279, gi... - gi\|229112163\|ref\|ZP_04241705.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus Rock1-15], g... gi\|206735593, gi... - gi\|206969905\|ref\|ZP_03230859.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus AH1134], gi\|... gi\|229192986, gi... - gi\|229192986\|ref\|ZP_04319942.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus ATCC 10876],... TRMB_BACC4 - tRNA (guanine-N(7)-)-methyltransferase OS=Bacillus cereus (strain B4264) GN=trmB PE=3 SV=1 gi\|229181017, gi... - gi\|229181017\|ref\|ZP_04308352.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus 172560W], gi... TRMB_BACCR - tRNA (guanine-N(7)-)-methyltransferase OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 / N... gi\|228804705, gi... - gi\|228954978\|ref\|ZP_04116995.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis serov... gi\|228923456, gi... - gi\|228923456\|ref\|ZP_04086741.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis serov... gi\|229081957, gi... - gi\|229081957\|ref\|ZP_04214448.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus Rock4-2], gi... gi\|229072203, gi... - gi\|229072203\|ref\|ZP_04205411.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus F65185], gi\|... gi\|228722923, gi... - gi\|229048408\|ref\|ZP_04193975.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus cereus AH676], gi\|2... gi\|228960973, gi... - gi\|228960973\|ref\|ZP_04122603.1\| tRNA (guanine-N(7)-)-methyltransferase [Bacillus thuringiensis serov...	2.0E-40	[1..217]	[1..217]
TRMB_BACCN - tRNA (guanine-N(7)-)-methyltransferase OS=Bacillus cytotoxicus (strain DSM 22905 / CIP 110041 / 391-...	1.0E-39	[1..217]	[1..217]
gi\|55737567, gi\|... - gb\|AAV63136.1\| conserved hypothetical protein, methyltransferase [Streptococcus thermophilus CNRZ106... TRMB_STRTD - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) G... TRMB_STRT1 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=trmB PE=3... TRMB_STRT2 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 1831...	2.0E-38	[1..212]	[1..212]
TRMB_STRA5 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus agalactiae serotype V (strain ATCC BAA-611 /... TRMB_STRA1 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / ... gi\|77414444, gi\|... - gi\|77414444\|ref\|ZP_00790595.1\| putative methyltransferase [Streptococcus agalactiae 515], gi\|7715948... gi\|77411670, gi\|... - gi\|77411670\|ref\|ZP_00788010.1\| methyltransferase, putative [Streptococcus agalactiae CJB111], gi\|771... gi\|77408776, gi\|... - gi\|77408776\|ref\|ZP_00785506.1\| methyltransferase, putative [Streptococcus agalactiae COH1], gi\|77172... gi\|77175021, gi\|... - gi\|77406352\|ref\|ZP_00783414.1\| methyltransferase, putative [Streptococcus agalactiae H36B], gi\|77175... gi\|76798052, gi\|... - gi\|76798052\|ref\|ZP_00780309.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus agalactiae 18RS... TRMB_STRA1 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus agalactiae serotype Ia GN=trmB PE=3 SV=1 TRMB_STRA3 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus agalactiae serotype III (strain NEM316) GN=t... TRMB_STRA3 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus agalactiae serotype III GN=trmB PE=3 SV=1 TRMB_STRA5 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus agalactiae serotype V GN=trmB PE=3 SV=1	1.0E-37	[1..211]	[1..211]
TRMB_STRPJ - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1... TRMB_STRZP - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae (strain P1031) GN=trmB PE=3 SV=1 TRMB_STRPI - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=trmB PE=... gi\|237650177 - gi\|237650177\|ref\|ZP_04524429.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae CCR... gi\|237821777 - gi\|237821777\|ref\|ZP_04597622.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae CCR... gi\|147930202, gi... - gi\|149021506\|ref\|ZP_01835561.1\| tRNA (guanine-N(7))-methyltransferase [Streptococcus pneumoniae SP23... TRMB_STRPN - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae GN=trmB PE=1 SV=1 gi\|147763380, gi... - gi\|149012575\|ref\|ZP_01833572.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae SP1... gi\|149005661, gi... - gi\|149005661\|ref\|ZP_01829400.1\| tRNA (guanine-N(7))-methyltransferase [Streptococcus pneumoniae SP18... TRMB_STRR6 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) GN=trm... gi\|149002222, gi... - gi\|149002222\|ref\|ZP_01827164.1\| tRNA (guanine-N(7))-methyltransferase [Streptococcus pneumoniae SP14... gi\|183573082, gi... - gi\|183573082\|gb\|EDT93610.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae SP195],... gi\|168485662, gi... - gi\|183571191\|gb\|EDT91719.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae CDC1087... gi\|183576911, gi... - gi\|183576911\|gb\|EDT97439.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae CDC3059... gi\|168490559, gi... - gi\|183574963\|gb\|EDT95491.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae CDC0288... gi\|147928965, gi... - gi\|148992339\|ref\|ZP_01822062.1\| tRNA (guanine-N(7)-)-methyltransferase [Streptococcus pneumoniae SP9... TRMB_STRP2 - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 746... TRMB_STRPN - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 /... TRMB_STRZJ - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus pneumoniae (strain JJA) GN=trmB PE=3 SV=1	1.0E-37	[1..211]	[1..211]
TRMB_ENTFA - tRNA (guanine-N(7)-)-methyltransferase OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=trmB ... gi\|227176105, gi... - gi\|227554806\|ref\|ZP_03984853.1\| tRNA (guanine-N(7))-methyltransferase [Enterococcus faecalis HH22], ... TRMB_ENTFA - tRNA (guanine-N(7)-)-methyltransferase OS=Enterococcus faecalis GN=trmB PE=3 SV=1	1.0E-37	[1..213]	[1..213]
TRMB_STRMU - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus mutans GN=trmB PE=3 SV=1 TRMB_STRMU - tRNA (guanine-N(7)-)-methyltransferase OS=Streptococcus mutans serotype c (strain ATCC 700610 / UA15...	4.0E-37	[1..211]	[1..211]

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Predicted Domain #1

Region A:
Residues: [1-217]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLRHKPYAM DRINEYSHIV IGNPEERAGN WKEVFGNEQP IHIEVGTGRG RFMYDMAKAN  60
   61 PHINYIGIEK FTSVVVDALD KLIEEELPNL KLINKDAEDL TVFFAKGEID RVYLNFSDPW 120
  121 PKKRHTKRRL TYKTFLRNYE EVLVEGGEIH FKTDNQGLFE YSLMSMAEYG MLLTYLSLDL 180
  181 HNSDFEGNIM TEYEEKFSSK GHRIYRVEAK YRTEPMQ

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	39.30103
Match:	1yzhA
Description:	Crystal Structure of the Conserved Hypothetical Protein, Methyltransferase from Streptococcus pneumoniae TIGR4
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
methyltransferase activity	4.06737071331982	bayes_pls_golite062009
transferase activity, transferring one-carbon groups	3.9962750833086	bayes_pls_golite062009
S-adenosylmethionine-dependent methyltransferase activity	3.74830027382001	bayes_pls_golite062009
RNA methyltransferase activity	3.6174490060285	bayes_pls_golite062009
rRNA methyltransferase activity	2.80578045927127	bayes_pls_golite062009
transferase activity	2.42370637689376	bayes_pls_golite062009
tRNA methyltransferase activity	2.15176183511624	bayes_pls_golite062009
catalytic activity	1.62377578202456	bayes_pls_golite062009
rRNA (adenine) methyltransferase activity	0.72946673557525	bayes_pls_golite062009
rRNA (adenine-N6,N6-)-dimethyltransferase activity	0.62885479399246	bayes_pls_golite062009
N-methyltransferase activity	0.49575399394607	bayes_pls_golite062009
tRNA (guanine) methyltransferase activity	0.355378060639199	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: