YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|30262264, gi\|...
Organism:	Bacillus anthracis str. Ames
Length:	633 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30262264, gi|....

Description	E-value	Query Range	Subject Range
gi\|228719336, gi... - gi\|229059923\|ref\|ZP_04197297.1\| Asparagine synthetase [Bacillus cereus AH603], gi\|228719336\|gb\|EEL70... gi\|228749681, gi... - gi\|229011526\|ref\|ZP_04168712.1\| Asparagine synthetase [Bacillus mycoides DSM 2048], gi\|228749681\|gb\|... gi\|229167090, gi... - gi\|229167090\|ref\|ZP_04294833.1\| Asparagine synthetase [Bacillus cereus AH621], gi\|228616324\|gb\|EEK73... gi\|229133082, gi... - gi\|229133082\|ref\|ZP_04261920.1\| Asparagine synthetase [Bacillus cereus BDRD-ST196], gi\|228650380\|gb\|... gi\|89153564, gi\|... - gi\|89208505\|ref\|ZP_01187008.1\| Asparagine synthase, glutamine-hydrolyzing [Bacillus weihenstephanens...	0.0	[1..633]	[1..633]
gi\|29895889, gi\|... - gi\|30020338\|ref\|NP_831969.1\| asparagine synthetase [glutamine-hydrolyzing] [Bacillus cereus ATCC 145...	0.0	[1..633]	[1..633]
gi\|152024191, gi... - gi\|89203381\|ref\|ZP_01182054.1\| Asparagine synthase, glutamine-hydrolyzing [Bacillus cereus subsp. cy...	0.0	[1..633]	[1..633]
gi\|42781344, gi\|... - gi\|42781344\|ref\|NP_978591.1\| asparagine synthetase, glutamine-hydrolyzing [Bacillus cereus ATCC 1098...	0.0	[30..633]	[2..605]
gi\|47554997, gi\|... - gi\|47568304\|ref\|ZP_00239006.1\| asparagine synthase (glutamine-hydrolyzing) [Bacillus cereus G9241], ...	0.0	[1..633]	[1..632]
gi\|89099665, gi\|... - gi\|89099665\|ref\|ZP_01172539.1\| ansB [Bacillus sp. NRRL B-14911], gi\|89085608\|gb\|EAR64735.1\| ansB [Ba...	0.0	[1..621]	[1..621]
gi\|221324520 - gi\|221324520\|ref\|ZP_03605814.1\| asparagine synthetase [Bacillus subtilis subsp. subtilis str. SMY] gi\|221320238 - gi\|221320238\|ref\|ZP_03601532.1\| asparagine synthetase [Bacillus subtilis subsp. subtilis str. JH642] gi\|221315321 - gi\|221315321\|ref\|ZP_03597126.1\| asparagine synthetase [Bacillus subtilis subsp. subtilis str. NCIB 3... ASNB_BACSU - Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Bacillus subtilis GN=asnB PE=1 SV=2 ASNB_BACSU - Asparagine synthetase [glutamine-hydrolyzing] 1 OS=Bacillus subtilis (strain 168) GN=asnB PE=1 SV=2	0.0	[1..627]	[1..627]
gi\|52004751, gi\|... - gi\|52786919\|ref\|YP_092748.1\| hypothetical protein BLi03195 [Bacillus licheniformis ATCC 14580], gi\|5...	0.0	[1..627]	[1..627]
gi\|56419441, gi\|... - gi\|56419441\|ref\|YP_146759.1\| asparagine synthetase [Geobacillus kaustophilus HTA426], gi\|56379283\|db...	0.0	[1..633]	[1..633]
gi\|74488841, gi\|... - gi\|75763674\|ref\|ZP_00743357.1\| Asparagine synthetase (glutamine-hydrolyzing) [Bacillus thuringiensis...	0.0	[40..629]	[5..594]

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Predicted Domain #1

Region A:
Residues: [1-633]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGFVGCLCE NPREFSETEK HQFENMNTMI FHRGPDDEGY FRDEHVQFGF RRLSIIDLEA  60
   61 GHQPLTYEND RYVIIFNGEI YNYVELREML LEKGATFATQ SDTEVIIALY AHMKEKCVDY 120
  121 LRGMFAFMIW DREEKKLFGA RDHFGIKPLY IAQQGDTTFF ASEKKSIMHV MEDKGVNPTS 180
  181 LQHYFTYQYG PEPETLTIDV NKIEPGHYFV KEIGKEMEIH RYWKPYFNAS SATKEEHIQA 240
  241 IRDVLYDSVK VHMRSDVPVG SFLSGGIDSS IIASIAREMN PNLLTFSVGF EQRGFSEVDV 300
  301 AKETAEKLGV KNHNVFISAK EFMDEFPKII WHMDDPLADP AAVPLYFVAK EARKHVTVVL 360
  361 SGEGADELFG GYNIYREPNS LKMFSYIPSP GKSVLKALSG ALKEGFKGKS FLERGCTPIE 420
  421 ERYYGNAKIF REEEKAELMK YYNESVNYMD ITKPLYNEIK DYDDVSKMQY IDMFTWLRGD 480
  481 ILLKADKMTM ANSLELRVPF LDKEVFDVAS KIPTEFKIAN GTTKAILREA ARGIVPDHVL 540
  541 DRKKLGFPVP IRHWLKDEMH DWAINIINES KTEHLIDKQY VLNLLEAHCA DKGDYSRKIW 600
  601 TVLAFMVWHQ IYVEHKYDTN KFHEETKRAY SLV

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	93.154902
Match:	1ct9A
Description:	Asparagine synthetase B, C-terminal domain; Asparagine synthetase B, N-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term	Confidence	Notes
asparagine synthase (glutamine-hydrolyzing) activity	4.78705745496116	bayes_pls_golite062009
carbon-nitrogen ligase activity, with glutamine as amido-N-donor	4.46367747407706	bayes_pls_golite062009
ligase activity	1.34640449962741	bayes_pls_golite062009
catalytic activity	1.19930793139888	bayes_pls_golite062009
N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity	0.837995469133101	bayes_pls_golite062009
ligase activity, forming carbon-nitrogen bonds	0.196167461233561	bayes_pls_golite062009

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits

Predicted functions: