YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: gi|30260534, gi|...
Organism: Bacillus anthracis str. Ames
Length: 361 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30260534, gi|....

Description E-value Query
Range
Subject
Range
gi|45385321 - gi|45385321|gb|AAM77643.2|AF517831_1 chloroplast omega-3 desaturase [Prunus persica]
272.0 [0..6] [344..98]
FAD3C_RICCO - Omega-3 fatty acid desaturase, chloroplastic OS=Ricinus communis GN=FAD7A-1 PE=2 SV=1
267.0 [0..6] [338..107]
gi|110084514 - gi|110084514|gb|ABG49414.1| chloroplast omega-3 fatty acid desaturase [Jatropha curcas]
266.0 [0..6] [337..104]
gi|45385976 - gi|45385976|gb|AAS59833.1| chloroplast omega-3 desaturase [Malus x domestica]
264.0 [0..6] [344..88]
gi|7433276, gi|2... - pir||T03029 omega-3 fatty acid desaturase (EC 1.14.99.-) FAD7 - common tobacco, gi|21668486|dbj|BAC...
261.0 [0..6] [338..92]
FAD3C_HELAN - sn-2 acyl-lipid omega-3 desaturase (ferredoxin), chloroplastic OS=Helianthus annuus GN=FAD7 PE=1 SV=...
258.0 [0..6] [342..95]
FAD3C_SESIN - Omega-3 fatty acid desaturase, chloroplastic OS=Sesamum indicum GN=FAD7 PE=2 SV=1
258.0 [0..6] [344..97]
gi|7433274, gi|3... - pir||T07685 omega-3 fatty acid desaturase (EC 1.14.99.-) - potato, gi|3550663|emb|CAA07638.1| w-3 de...
257.0 [0..9] [338..85]
gi|7378667 - gi|7378667|emb|CAB85467.1| chloroplast omega-3 fatty acid desaturase [Brassica juncea]
256.0 [0..6] [338..79]

Back

Predicted Domain #1
Region A:
Residues: [1-134]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKELHTFGWY AARVSPHLPK KAFKPVPTRL FGGLAYLLVA LAGLISIGVF ELNVWANLGI  60
   61 AIVLGLCFAS LGFLGHEILH GTVVRKAWLR DFLGAIAFMP LSTGPKLWRK WHNATHHVHT 120
  121 QHEENDPDAW PTLE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [135-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLKKSKFLSW VYRMPLHVRS FFSFLSLTIQ FTLHSTRMFF HFIKEFKSSN QKSVWLQLLL  60
   61 PWTVWISLLF IMGPGKWLFA YVIPLLIANF IVMAYIATNH RLNPIVPVND PLANCLSVTV 120
  121 PRWVDVLHFN FSYHTEHHLF PA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-361]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSKYYPLVK EKIKEMWPER YHEMPMTKAL AALWNTPRVY YQGSELVDPH REHFYGSLGN  60
   61 GLDPHNISYR EEHIEEEESI KKVNQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle