YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|47570436, gi\|...
Organism:	Bacillus cereus G9241
Length:	278 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|47570436, gi|....

Description	E-value	Query Range	Subject Range
gi\|89202247, gi\|... - gi\|89202247\|ref\|ZP_01180975.1\| PSP1 C-terminal conserved region [Bacillus cereus subsp. cytotoxis NV...	0.0	[4..278]	[1..275]
gi\|229170884, gi... - gi\|229170884\|ref\|ZP_04298487.1\| Stage 0 sporulation protein yaaT [Bacillus cereus MM3], gi\|228612550... gi\|228624222, gi... - gi\|229159207\|ref\|ZP_04287232.1\| Stage 0 sporulation protein yaaT [Bacillus cereus R309803], gi\|22862... gi\|229153812, gi... - gi\|229153812\|ref\|ZP_04281943.1\| Stage 0 sporulation protein yaaT [Bacillus cereus ATCC 4342], gi\|228... gi\|229148442, gi... - gi\|229148442\|ref\|ZP_04276699.1\| Stage 0 sporulation protein yaaT [Bacillus cereus m1550], gi\|2286349... gi\|228589013, gi... - gi\|229194423\|ref\|ZP_04321227.1\| Stage 0 sporulation protein yaaT [Bacillus cereus m1293], gi\|2285890... gi\|229188318, gi... - gi\|229188318\|ref\|ZP_04315367.1\| Stage 0 sporulation protein yaaT [Bacillus cereus ATCC 10876], gi\|22... gi\|229182427, gi... - gi\|229182427\|ref\|ZP_04309679.1\| Stage 0 sporulation protein yaaT [Bacillus cereus BGSC 6E1], gi\|2286... gi\|30018304, gi\|... - gi\|30018304\|ref\|NP_829935.1\| tpl protein [Bacillus cereus ATCC 14579], gi\|29893844\|gb\|AAP07136.1\| Tp... gi\|229176633, gi... - gi\|229176633\|ref\|ZP_04304038.1\| Stage 0 sporulation protein yaaT [Bacillus cereus 172560W], gi\|22860... gi\|229603121, gi... - gi\|229603121\|ref\|YP_002864683.1\| hypothetical protein BAA_0041 [Bacillus anthracis str. A0248], gi\|2... gi\|195991047, gi... - gi\|196036417\|ref\|ZP_03103814.1\| conserved hypothetical protein [Bacillus cereus W], gi\|195991047\|gb\|... gi\|196027392, gi... - gi\|196041772\|ref\|ZP_03109062.1\| conserved hypothetical protein [Bacillus cereus NVH0597-99], gi\|1960... gi\|172080178, gi... - gi\|177655337\|ref\|ZP_02936866.1\| conserved hypothetical protein [Bacillus anthracis str. A0174], gi\|1... gi\|190559915, gi... - gi\|190568991\|ref\|ZP_03021892.1\| conserved hypothetical protein [Bacillus anthracis Tsiankovskii-I], ... gi\|170688891, gi... - gi\|170688891\|ref\|ZP_02880093.1\| conserved hypothetical protein [Bacillus anthracis str. A0465], gi\|1... gi\|170707555, gi... - gi\|170707555\|ref\|ZP_02898008.1\| conserved hypothetical protein [Bacillus anthracis str. A0389], gi\|1... gi\|167635079, gi... - gi\|167635079\|ref\|ZP_02393396.1\| conserved hypothetical protein [Bacillus anthracis str. A0442], gi\|1... gi\|167510512, gi... - gi\|167641527\|ref\|ZP_02399775.1\| conserved hypothetical protein [Bacillus anthracis str. A0193], gi\|1... gi\|165872572, gi... - gi\|165872572\|ref\|ZP_02217204.1\| conserved hypothetical protein [Bacillus anthracis str. A0488], gi\|1... gi\|227812705, gi... - gi\|227812705\|ref\|YP_002812714.1\| hypothetical protein BAMEG_0041 [Bacillus anthracis str. CDC 684], ... gi\|225790304, gi... - gi\|225862084\|ref\|YP_002747462.1\| hypothetical protein BCA_0041 [Bacillus cereus 03BB102], gi\|2257903... gi\|228918983, gi... - gi\|228918983\|ref\|ZP_04082363.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar hua... gi\|228912772, gi... - gi\|228912772\|ref\|ZP_04076420.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar pul... gi\|228853769, gi... - gi\|228905829\|ref\|ZP_04069727.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis IBL 200], g... gi\|228898786, gi... - gi\|228898786\|ref\|ZP_04063069.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis IBL 4222], ... gi\|228943839, gi... - gi\|228943839\|ref\|ZP_04106225.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar mon... gi\|228822293, gi... - gi\|228937335\|ref\|ZP_04099982.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar ber... gi\|228828087, gi... - gi\|228931535\|ref\|ZP_04094442.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar and... gi\|228834333, gi... - gi\|228925286\|ref\|ZP_04088383.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar pon... gi\|228789456, gi... - gi\|228970221\|ref\|ZP_04130881.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar thu... gi\|228963130, gi... - gi\|228963130\|ref\|ZP_04124300.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar sot... gi\|228956474, gi... - gi\|228956474\|ref\|ZP_04118271.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar pak... gi\|228809056, gi... - gi\|228950581\|ref\|ZP_04112716.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar kur... gi\|229039937, gi... - gi\|229039937\|ref\|ZP_04189702.1\| Stage 0 sporulation protein yaaT [Bacillus cereus AH676], gi\|2287273... gi\|229027880, gi... - gi\|229027880\|ref\|ZP_04184035.1\| Stage 0 sporulation protein yaaT [Bacillus cereus AH1271], gi\|228733... gi\|228776402, gi... - gi\|228983288\|ref\|ZP_04143502.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis serovar toc... gi\|228782887, gi... - gi\|228976791\|ref\|ZP_04137204.1\| Stage 0 sporulation protein yaaT [Bacillus thuringiensis Bt407], gi\|... gi\|229107719, gi... - gi\|229107719\|ref\|ZP_04237356.1\| Stage 0 sporulation protein yaaT [Bacillus cereus Rock1-15], gi\|2286... gi\|229089165, gi... - gi\|229089165\|ref\|ZP_04220447.1\| Stage 0 sporulation protein yaaT [Bacillus cereus Rock3-42], gi\|2286... gi\|229077309, gi... - gi\|229077309\|ref\|ZP_04209990.1\| Stage 0 sporulation protein yaaT [Bacillus cereus Rock4-2], gi\|22870... gi\|229067797, gi... - gi\|229067797\|ref\|ZP_04201115.1\| Stage 0 sporulation protein yaaT [Bacillus cereus F65185], gi\|228715... gi\|229142838, gi... - gi\|229142838\|ref\|ZP_04271281.1\| Stage 0 sporulation protein yaaT [Bacillus cereus BDRD-ST24], gi\|228... gi\|228646543, gi... - gi\|229136878\|ref\|ZP_04265506.1\| Stage 0 sporulation protein yaaT [Bacillus cereus BDRD-ST26], gi\|228... gi\|228657867, gi... - gi\|229125550\|ref\|ZP_04254583.1\| Stage 0 sporulation protein yaaT [Bacillus cereus BDRD-Cer4], gi\|228... gi\|228663720, gi... - gi\|229119695\|ref\|ZP_04248957.1\| Stage 0 sporulation protein yaaT [Bacillus cereus 95/8201], gi\|22866... gi\|218538806, gi... - gi\|218901233\|ref\|YP_002449067.1\| hypothetical protein BCAH820_0037 [Bacillus cereus AH820], gi\|21853... gi\|218235276, gi... - gi\|218235276\|ref\|YP_002364882.1\| hypothetical protein BCB4264_A0037 [Bacillus cereus B4264], gi\|2181... gi\|218544491, gi... - gi\|218895168\|ref\|YP_002443579.1\| hypothetical protein BCG9842_B5279 [Bacillus cereus G9842], gi\|2185... gi\|206743842, gi... - gi\|206977936\|ref\|ZP_03238823.1\| conserved hypothetical protein [Bacillus cereus H3081.97], gi\|206743... gi\|217957608, gi... - gi\|217957608\|ref\|YP_002336150.1\| hypothetical protein BCAH187_A0041 [Bacillus cereus AH187], gi\|2170... gi\|196047368, gi... - gi\|196047368\|ref\|ZP_03114581.1\| conserved hypothetical protein [Bacillus cereus 03BB108], gi\|1960217... gi\|206972594, gi... - gi\|206972594\|ref\|ZP_03233537.1\| conserved hypothetical protein [Bacillus cereus AH1134], gi\|20673249...	0.0	[4..278]	[1..275]
gi\|229053880, gi... - gi\|229053880\|ref\|ZP_04195315.1\| Stage 0 sporulation protein yaaT [Bacillus cereus AH603], gi\|2287214... gi\|229009543, gi... - gi\|229009543\|ref\|ZP_04166770.1\| Stage 0 sporulation protein yaaT [Bacillus mycoides DSM 2048], gi\|22... gi\|229165022, gi... - gi\|229165022\|ref\|ZP_04292818.1\| Stage 0 sporulation protein yaaT [Bacillus cereus AH621], gi\|2286184... gi\|229131040, gi... - gi\|229131040\|ref\|ZP_04259953.1\| Stage 0 sporulation protein yaaT [Bacillus cereus BDRD-ST196], gi\|22... gi\|89154894, gi\|... - gi\|89207214\|ref\|ZP_01185760.1\| PSP1 C-terminal conserved region [Bacillus weihenstephanensis KBAB4],...	0.0	[4..278]	[1..275]
gi\|74489689, gi\|... - gi\|75762822\|ref\|ZP_00742643.1\| Phosphorelay inhibitor [Bacillus thuringiensis serovar israelensis AT...	0.0	[1..278]	[1..278]
gi\|221312163 - gi\|221312163\|ref\|ZP_03593968.1\| hypothetical protein BsubsN3_00160 [Bacillus subtilis subsp. subtili... gi\|221317096 - gi\|221317096\|ref\|ZP_03598390.1\| hypothetical protein BsubsJ_00160 [Bacillus subtilis subsp. subtilis... gi\|221321359 - gi\|221321359\|ref\|ZP_03602653.1\| hypothetical protein BsubsS_00160 [Bacillus subtilis subsp. subtilis... YAAT_BACSU - Stage 0 sporulation protein YaaT OS=Bacillus subtilis (strain 168) GN=yaaT PE=3 SV=1 YAAT_BACSU - Stage 0 sporulation protein yaaT OS=Bacillus subtilis GN=yaaT PE=4 SV=1	0.0	[4..278]	[1..275]
gi\|89084110, gi\|... - gi\|89101175\|ref\|ZP_01174007.1\| signal peptidase-like protein [Bacillus sp. NRRL B-14911], gi\|8908411...	0.0	[4..278]	[1..275]
gi\|52346391, gi\|... - gi\|52783889\|ref\|YP_089718.1\| YaaT [Bacillus licheniformis ATCC 14580], gi\|52346391\|gb\|AAU39025.1\| Ya...	0.0	[4..278]	[1..275]
gi\|22775718, gi\|... - gi\|23097495\|ref\|NP_690961.1\| signal peptidase II [Oceanobacillus iheyensis HTE831], gi\|22775718\|dbj\|...	0.0	[4..276]	[1..273]
gi\|56418561, gi\|... - gi\|56418561\|ref\|YP_145879.1\| signal peptidase II [Geobacillus kaustophilus HTA426], gi\|56378403\|dbj\|...	0.0	[4..278]	[1..275]
gi\|56908069, gi\|... - gi\|56961835\|ref\|YP_173557.1\| hypothetical protein ABC0053 [Bacillus clausii KSM-K16], gi\|56908069\|db...	0.0	[4..278]	[1..275]

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Predicted Domain #1

Region A:
Residues: [1-165]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTVLYDVVGV RFKKAGKVYY FDPNQFDISE NEFVIVETVR GIEYGKVVIT KKQVDENDVV  60
   61 LPLKKVIRIA NENDRTIVEE NKHAAKEAYQ VCQQKVVEHN LDMKLVDVEY TFDRNKIIFY 120
  121 FTADGRIDFR ELVKDLAAIF RTRIELRQIG VRDEAKMLGG IGPCG

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	52.026872
Match:	PF04468.3
Description:	No description for PF04468.3 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [166-278]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RMLCCSTFLG DFEPVSIKMA KDQNLSLNPA KISGLCGRLM CCLKYENDEY EAAKEQLPDL  60
   61 DQRIQTPHGT GRVIGLNILE RLIQVELVDK ERIVEYTLDE LVNKGVVSSQ TTD

[Run NCBI BLAST on this sequence.]

Detection Method:

MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits