YRC Public Data Repository - Protein Structure Prediction

Protein:	CRCB3_STRAW
Organism:	Streptomyces avermitilis MA-4680
Length:	204 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRCB3_STRAW.

Description	E-value	Query Range	Subject Range
gi\|218900224, gi... - gi\|218900224\|ref\|YP_002448635.1\| crcB protein [Bacillus cereus G9842], gi\|218540671\|gb\|ACK93065.1\| c... gi\|75760557, gi\|... - gi\|75760557\|ref\|ZP_00740591.1\| CrcB family protein [Bacillus thuringiensis serovar israelensis ATCC ... gi\|228791497, gi... - gi\|228968194\|ref\|ZP_04129194.1\| Protein crcB 1 [Bacillus thuringiensis serovar sotto str. T04001], g... gi\|228903577, gi... - gi\|228903577\|ref\|ZP_04067698.1\| Protein crcB 1 [Bacillus thuringiensis IBL 4222], gi\|228856006\|gb\|EE...	145.0	[0..62]	[189..12]
gi\|253569647, gi... - gi\|253569647\|ref\|ZP_04847056.1\| camphor resistance CrcB protein [Bacteroides sp. 1_1_6], gi\|25184002... CRCB_BACTN - Protein CrcB homolog OS=Bacteroides thetaiotaomicron GN=crcB PE=3 SV=1 CRCB_BACTN - Putative fluoride ion transporter CrcB OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079...	144.0	[0..59]	[180..1]
gi\|47555936, gi\|... - gi\|47567315\|ref\|ZP_00238028.1\| crcB protein [Bacillus cereus G9241], gi\|47555936\|gb\|EAL14274.1\| crcB...	143.0	[0..58]	[192..1]
CRCB1_BACC1 - Putative fluoride ion transporter CrcB 1 OS=Bacillus cereus (strain ATCC 10987 / NRS 248) GN=crcB1 P...	142.0	[0..58]	[192..1]
gi\|89204977, gi\|... - gi\|89204977\|ref\|ZP_01183550.1\| Camphor resistance CrcB protein [Bacillus weihenstephanensis KBAB4], ...	141.0	[0..57]	[189..7]
CRCB1_BACHK - Putative fluoride ion transporter CrcB 1 OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) G... CRCB1_BACHK - Protein CrcB homolog 1 OS=Bacillus thuringiensis subsp. konkukian GN=crcB1 PE=3 SV=1	141.0	[0..62]	[192..5]
CRCB_GEODF - Putative fluoride ion transporter CrcB OS=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32)...	140.0	[0..60]	[182..1]
CRCB1_BACCR - Putative fluoride ion transporter CrcB 1 OS=Bacillus cereus (strain ATCC 14579 / DSM 31 / JCM 2152 /...	140.0	[0..57]	[189..7]
gi\|30692518, gi\|... - gi\|30692518\|gb\|AAP33390.1\| CrcB [Bacillus thuringiensis serovar aizawai], gi\|221665115\|gb\|ACM24761.1...	140.0	[0..59]	[186..27]
CRCB1_CLOAB - Putative fluoride ion transporter CrcB 1 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / ... CRCB1_CLOAB, CRB... - Protein CrcB homolog 1 OS=Clostridium acetobutylicum GN=crcB1 PE=3 SV=1, (Q97IQ4) Protein crcB homol...	139.0	[0..60]	[196..1]

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Predicted Domain #1

Region A:
Residues: [1-57]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRADESGPER ESREPTHIPG AEPELGGEPT PRGEPGPGFE PGPGGEPAPS RAPFRSR

[Run NCBI BLAST on this sequence.]

Detection Method:	FFAS03
Confidence:	1.27
Match:	1q1qA
Description:	Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
Matching Structure (courtesy of the PDB):

Predicted Domain #2

Region A:
Residues: [58-204]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LRKGVLAAVA LGGVLGGSAR YALGLTFPTP RGTFPVTTFA VNVSGAFLLA LLLVYVLEIW  60
   61 PPTRYVRPFA AVGFLGSFTT FSTWMVDTDR LLGHGHYAVA AFNVFGSLFA GLAATGLGLA 120
  121 IGRMALARRV RLAARHGRAR RYGWWVR

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	27.522879
Match:	PF02537.6
Description:	No description for PF02537.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits