| Protein: | gi|16329189, gi|... |
| Organism: | Synechocystis sp. PCC 6803 |
| Length: | 321 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|16329189, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
401.0 | [0..3] | [319..11] |
|
|
365.0 | [0..2] | [313..1] |
|
|
361.0 | [0..2] | [316..1] |
|
|
352.0 | [0..2] | [316..1] |
|
Region A: Residues: [1-136] |
1 11 21 31 41 51
| | | | | |
1 MINCQFCSVI SKSNGEDPIG TANSSDRWLI MELPQPWTEE RFHHDPILKP IHDLFHQLSD 60
61 QGVKVSPMAI ASDHEYSQSG FSRIIHYQKF NLLFSSFIKE EYLVPDDQRW DLIKNLCYQS 120
121 PELENFRNYK LSDVVD
|
| Detection Method: |  |
| Confidence: | 3.853872 |
| Match: | PF06999.3 |
| Description: | No description for PF06999.3 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.496 | N/A | N/A | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.467 | N/A | N/A | c.78.2 | Aspartate/glutamate racemase |
| View | Download | 0.410 | N/A | N/A | c.52.2 | tRNA splicing endonuclease, C-terminal domain |
| View | Download | 0.376 | N/A | N/A | c.26.1 | Nucleotidylyl transferase |
|
Region A: Residues: [137-225] |
1 11 21 31 41 51
| | | | | |
1 RDMMVCTHGN IDVACSRFGY PIYKQLRQKY ASKNLRIWRC SHFGGHQFAP TLIDFPNGQV 60
61 WGHLESEVLD NLVRQEGQVK QLYKFYRGW
|
| Detection Method: | |
| Confidence: | 18.69897 |
| Match: | 1f37A |
| Description: | Thioredoxin-like 2Fe-2S ferredoxin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [226-321] |
1 11 21 31 41 51
| | | | | |
1 VGVTKFAQIV EREIWTQRGW QWLNYQKSAQ ILNMDDNQHD PNWVEVQFDF ISPDKVKGAY 60
61 FARVEVNGSV MTARNSGDEL ISVKQYSVSY LKEIDK
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.631 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.586 | d.204.1 | Ribosome binding protein Y (YfiA homologue) |
| View | Download | 0.577 | d.17.5 | Uracil-DNA glycosylase inhibitor protein |
| View | Download | 0.565 | d.1.1 | Microbial ribonucleases |
| View | Download | 0.554 | a.74.1 | Cyclin-like |
| View | Download | 0.554 | a.74.1 | Cyclin-like |
| View | Download | 0.552 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
| View | Download | 0.539 | d.17.5 | Uracil-DNA glycosylase inhibitor protein |
| View | Download | 0.537 | a.60.8 | HRDC-like |
| View | Download | 0.525 | b.61.4 | Quinohemoprotein amine dehydrogenase A chain, domain 3 |
