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View Structure Prediction Details

Protein: gi|7470022
Organism: Synechocystis sp.
Length: 321 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7470022.

Description E-value Query
Range
Subject
Range
gi|17230100, gi|... - gi|17230100|ref|NP_486648.1| hypothetical protein all2608 [Nostoc sp. PCC 7120], gi|17131701|dbj|BAB...
gi|25381569 - pir||AI2131 hypothetical protein all2608 [imported] - Nostoc sp. (strain PCC 7120)
401.0 [0..3] [319..11]
gi|23130576, gi|... - gi|23130576|ref|ZP_00112389.1| COG4759: Uncharacterized protein conserved in bacteria containing thi...
365.0 [0..2] [313..1]
gi|75704262, gi|... - gi|75910537|ref|YP_324833.1| hypothetical protein Ava_4340 [Anabaena variabilis ATCC 29413], gi|7570...
361.0 [0..2] [316..1]
gi|71677821, gi|... - gi|71677821|ref|ZP_00675555.1| protein of unknown function DUF942 [Trichodesmium erythraeum IMS101],...
352.0 [0..2] [316..1]

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Predicted Domain #1
Region A:
Residues: [1-136]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINCQFCSVI SKSNGEDPIG TANSSDRWLI MELPQPWTEE RFHHDPILKP IHDLFHQLSD  60
   61 QGVKVSPMAI ASDHEYSQSG FSRIIHYQKF NLLFSSFIKE EYLVPDDQRW DLIKNLCYQS 120
  121 PELENFRNYK LSDVVD

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 3.853872
Match: PF06999.3
Description: No description for PF06999.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [137-225]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RDMMVCTHGN IDVACSRFGY PIYKQLRQKY ASKNLRIWRC SHFGGHQFAP TLIDFPNGQV  60
   61 WGHLESEVLD NLVRQEGQVK QLYKFYRGW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.69897
Match: 1f37A
Description: Thioredoxin-like 2Fe-2S ferredoxin
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [226-321]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGVTKFAQIV EREIWTQRGW QWLNYQKSAQ ILNMDDNQHD PNWVEVQFDF ISPDKVKGAY  60
   61 FARVEVNGSV MTARNSGDEL ISVKQYSVSY LKEIDK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle