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View Structure Prediction Details

Protein: gi|7470670
Organism: Synechocystis sp.
Length: 65 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7470670.

Description E-value Query
Range
Subject
Range
PGR5_ARATH - Protein PROTON GRADIENT REGULATION 5, chloroplastic OS=Arabidopsis thaliana GN=PGR5 PE=1 SV=1
114.0 [0..1] [65..69]
gi|67968361, gi|... - gi|67968361|dbj|BAE00074.1| PGR5 [Zea mays], gi|162461380|ref|NP_001105792.1| pgr5 protein [Zea mays...
113.0 [0..1] [65..63]
gi|67968357 - gi|67968357|dbj|BAE00072.1| PGR5 [Amaranthus hybridus]
111.0 [0..1] [65..61]
gi|5902602 - gi|5902602|gb|AAD55571.1|AF110789_1 unknown [Volvox carteri f. nagariensis]
109.0 [0..2] [65..81]
gi|48093522 - gi|48093522|gb|AAT40138.1| unknown [Bassia scoparia]
107.0 [0..1] [65..17]
gi|67968359 - gi|67968359|dbj|BAE00073.1| PGR5 [Portulaca oleracea]
107.0 [0..1] [65..59]
gi|67968363 - gi|67968363|dbj|BAE00075.1| PGR5 [Portulaca grandiflora]
106.0 [0..1] [65..59]
gi|51965122, gi|... - gi|51965122|ref|XP_507345.1| PREDICTED OSJNBa0044E16.27 gene product [Oryza sativa (japonica cultiva...
gi|125562613 - gi|125562613|gb|EAZ08061.1| hypothetical protein OsI_30326 [Oryza sativa Indica Group]
105.0 [0..1] [65..61]
gi|47026897 - gi|47026897|gb|AAT08671.1| unknown [Hyacinthus orientalis]
101.0 [0..1] [65..15]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFAPIVILVR QQLGKAKFNQ IRGKAIALHC QTITNFCNRV GIDAKQRQNL IRLAKSNGKT  60
   61 LGLLA

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.693 a.23.7 Description not found.
View Download 0.682 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.682 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.667 a.276.1 Description not found.
View Download 0.663 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.663 a.27.1 Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases
View Download 0.643 a.17.1 p8-MTCP1
View Download 0.624 a.51.1 Cytochrome c oxidase subunit h
View Download 0.575 a.36.1 Signal peptide-binding domain
View Download 0.560 a.153.1 Nuclear receptor coactivator interlocking domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle