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View Structure Prediction Details

Protein: gi|115458784, gi...
Organism: Oryza sativa Japonica Group
Length: 343 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115458784, gi....

Description E-value Query
Range
Subject
Range
gi|27529810 - gi|27529810|dbj|BAC53811.1| OsNAC2 protein [Oryza sativa]
427.0 [0..10] [343..1]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQHQGQAGM DLPPGFRFHP TDEELITHYL AKKVADARFA ALAVAEADLN KCEPWDLPSL  60
   61 AKMGEKEWYF FCLKDRKYPT GLRTNRATES GYWKATGKDK DIFRRKALVG MKKTLVFYTG 120
  121 RAPKGEKSGW VMHEYRLHGK LHAAALGFLH GKPASSKNEW VLCRVFKKSL VEV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 65.522879
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [174-343]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GAAGGKKAAV VTMEMARGGS TSSSVADEIA MSSVVLPPLM DMSGAGAGAV DPATTAHVTC  60
   61 FSNALEGQFF NPTAVHGHGG GDSSPFMASF TQYGQLHHGV SLVQLLESCN GYGGLVDMAA 120
  121 SGSQLQPAAC GGERERLSAS QDTGLTSDVN PEISSSSGQK FDHEAALWGY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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