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View Structure Prediction Details

Protein: gi|13486693, gi|...
Organism: Oryza sativa Japonica Group
Length: 218 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|13486693, gi|....

Description E-value Query
Range
Subject
Range
gi|215767624, gi... - gi|54290815|dbj|BAD61454.1| putative glutathione transferase F4 [Oryza sativa Japonica Group], gi|54...
189.0 [0..1] [218..16]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPVKVFGRA ISTNVSRVLV CLEEVGADYE LVTVDFLAGE QNSPEHVERN PFGKIPALQD  60
   61 GDLVLFESRA IAKYILRKYK SSKVDLLRES DIREAALVDV WTEVEAHQYY PALSPIVFEC 120
  121 IIFPIMRGVP TNQQVVHESL EKLKKVLETY EARLSGSRYL AGDFLSFADL NHFPFTFYFM 180
  181 ATPCASLFDA YPHVKAWWEG LMSRPSIKKI SANMPTKF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 40.221849
Match: 1byeA
Description: Class phi GST
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antioxidant activity 3.66884588063322 bayes_pls_golite062009
peroxidase activity 3.43831566988273 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 3.43831566988273 bayes_pls_golite062009
glutathione peroxidase activity 2.56524997297011 bayes_pls_golite062009
peroxiredoxin activity 2.12777217096121 bayes_pls_golite062009
glutathione binding 2.07086805531749 bayes_pls_golite062009
thioredoxin peroxidase activity 1.96134566495756 bayes_pls_golite062009
glutathione transferase activity 1.85683051472829 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 1.8187537496904 bayes_pls_golite062009
selenium binding 1.57446915214149 bayes_pls_golite062009
protein disulfide oxidoreductase activity 1.47769936616412 bayes_pls_golite062009
disulfide oxidoreductase activity 1.32811008894503 bayes_pls_golite062009
binding 0.704132579378598 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
receptor binding 0.0226227421058591 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle