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View Structure Prediction Details

Protein: gi|30017488, gi|...
Organism: Oryza sativa Japonica Group
Length: 1657 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

No multiple sequence alignment data found for gi|30017488, gi|....

Predicted Domain #1
Region A:
Residues: [1-117]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRQWMYADR RSKEFINGVH YFLRVAEANR QRGFICCPCN KCKNQKEYSA SRTIHFHLFE  60
   61 SGFMPSYNCW TSHGEQGVEM EEDEVEDDNI PDFAQYVGFE GNQTGEEEIV ADGNDVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [118-301]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDLGQMLQDA REDCESEKEA HKLDKMLEDH RTSLYPGCEQ GHKKLDTTLE LLQWKAKNGV  60
   61 SDKAFGDLLK LVKNILPGGN KLPETTYEAK KIVCPLGLEV HKIHACPNDC ILYRGEEYEN 120
  121 LEACPVCKAL RYKIRRDDPG EVDGQLTKKR IPAKVMWYFP IIPRLRRLFR NKGNARMLRW 180
  181 HAEE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [302-495]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RQQDGMLRHP ADGSQWRNID RKFKEFGKDA RNIRFGPKQP GNDIDVYLRP LVEDLKQLWK  60
   61 KEGVPVWDED KQEEFNLRAL LFVTINDWPA LSNLSGQSNK GYKACTHCMD ETKNTYLKHC 120
  121 RKVVYMGHRR FLAANHPVRK KGKHFEHKAD HRTKPKYRSG KTVFAMVKDV KVVFGKGPGS 180
  181 QHIESEDSHA AMWK

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 97.823909
Match: PF02992.6
Description: No description for PF02992.6 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [496-618]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KNSIFWELPY WEFLDVRHAI DVMHLTKNLC VNLLGFLGVY GKSKDTLEAL VIRGILPDNV  60
   61 RATIKKLCAF MNAISQKVID PDRLEALQNE VVQCLVSFDL IFPPSFFNIM THLLCHLVKE 120
  121 IRI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [619-787]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGPMYLHNMF PFERYMGVLK KYVRNRARPE ACIAKGYGTE EVIEFCVEFI EDLRPIGVPE  60
   61 SRHEGRLRGK GTLGRKAITT VDNNLFRKAH FTVLQHSSLV APYIEEHLAL VRARNIGKSD 120
  121 AWITRHHIDT FPAWLRQHLM DNESINQQLA FLARGPSGSI ATFQGYEIN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [788-962]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYTFYTRAQD MKSTNQNSAV RVDAMGYDGT TATYYGAIED IWELDYGPLK VPLFWCQWVR  60
   61 LTGGGVMIDD SGMTTVDLNK VGYSDEPFVL ANDVTQVFFV KDMSSKGKKG RGPDEPKCQV 120
  121 VLPGKRKIVG VEDKTDEDYD QLDGQPPFTV TIDPSILLSN EDTPYSRNDH KEGTI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [963-1372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GTFRPDRDRD EVTLALQTPE HPGRTRGKGV IPWKIGFKED IHTYRSRMRS KRDTEAKIAD  60
   61 LEFRVSSYEL NMQEEVARKV DERMAAHRSH DPQPTIPPAM VSPSGNRSSC ASTGQVASGM 120
  121 AIPTDPSGTY HCRPIPAGYS KVDVELVEGM YEDLELDYPG GDGETHLRDT CHAIILWRRR 180
  181 YIILPGRQAA SRAPSPPAPP SPPQDPAPSP PHAPPAPSPP QAPASTPPQD PAPTPPRAPT 240
  241 PTPPQAPLPA PSKSRAPPAP PPAHTRATKK AKVDAAKNKD PGYDCTQEEL DAYVASEVKR 300
  301 QFKPRSLEKK IPIYPSVRNF FRGMSASVKE AIKLSDYERT LKKASSGKSK PVPQLGEQPN 360
  361 LEIEPLVTGK EMTIEQFITD TGLTTDQLLG VAPIEKAEVK YMYELGKPLV 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 3.30103
Match: 1y0fA
Description: No description for 1y0fA was found.

Predicted Domain #8
Region A:
Residues: [1373-1657]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KPELLQSLPT QMYKFHQLYM EMSATGREMI GARIRDTDFL QGDDILWINF RGIYELYQLD  60
   61 ALDVSIMSCW ILMEIQRARR RRVFDTGFID PRKVNAAMLD QYPQETEDNL VHLLKAQHYK 120
  121 TFILLPYNTE FHWVLLLIDL EACTVNVYDS MDKKESTFDK VFELIDRAWY RFRHLVRGKW 180
  181 RERLRRKFKF PCAKQKQGTN LCGYYVCEYC HCLADQIITT RELDFIRMRD NLTTHKEFIA 240
  241 AVQEQLMGFI NEEILDPKGE FYYDGNTIHR SLASELAAST TTSKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 2iycA
Description: No description for 2iycA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle