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View Structure Prediction Details

Protein: gi|49389258, gi|...
Organism: Oryza sativa Japonica Group
Length: 146 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|49389258, gi|....

Description E-value Query
Range
Subject
Range
gi|7486978, gi|7... - pir||T10648 hypothetical protein T13K14.220 - Arabidopsis thaliana, gi|7268903|emb|CAB79106.1| putat...
69.0 [0..1] [42..1]
gi|102139790 - gi|102139790|gb|ABF69975.1| hypothetical protein MA4_106O17.12 [Musa acuminata]
68.0 [0..2] [42..3]
gi|92891726 - gi|92891726|gb|ABE90938.1| conserved hypothetical protein [Medicago truncatula]
67.0 [0..1] [43..1]

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Predicted Domain #1
Region A:
Residues: [1-146]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAQAAARI MTEVAPPQLV SVMRRRKQVA RSLDTIAEDD RELMHQVPYA GDGHHHGVKK  60
   61 QAAATSSAST FATPTLAFER QPPPAPAPAP ASGFMRGLSK WFSNNGVHGQ EGWPEIGREG 120
  121 HRRAIYSQQA HIRGRATGLN SSSLTS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.290 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.290 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.264 d.110.4 SNARE-like
View Download 0.264 d.110.4 SNARE-like
View Download 0.234 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.234 a.45.1 Glutathione S-transferase (GST), C-terminal domain
View Download 0.233 a.40.1 Calponin-homology domain, CH-domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle