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View Structure Prediction Details

Protein: CSTR5_ORYSJ
Organism: Oryza sativa Japonica Group
Length: 405 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSTR5_ORYSJ.

Description E-value Query
Range
Subject
Range
CSTR4_ORYSI - CMP-sialic acid transporter 4 OS=Oryza sativa subsp. indica GN=CSTLP4 PE=3 SV=1
192.0 [0..1] [404..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRNGVVECS VCRSRLVVPS PRSVSRAYDK HRSKISSKFR ALNVLLVVGD CILVGLQPIL  60
   61 VFMSKVDGKF QFSPISVNFL TEVTKVVFAI VMLIIQSR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KQKVGEKPLL ARSTFIQAAR NNALLAVPAL LYAINNYLKF IMQLYFNPST VKMLSNLKVL  60
   61 VIAVLLKFIM KRRFSVIQWE ALALLLIGIS INQLRTVPAG NTAFGLPVTA IAYIYTLIFV 120
  121 TVPSLASVYN EYALKSQYDT SIYLQNLFLY GYGAIFNFLG ILGTALFQGP ESFNILR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.7
Match: 2i68A
Description: No description for 2i68A was found.

Predicted Domain #3
Region A:
Residues: [276-405]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GHSRATMFLI CNNAAQGILS SFFFKYADTI LKKYSSTVAT IFTGLASAAF LGHTLTINFL  60
   61 LGISVVFISM HQFFSPLAKA KDDKPAELLE LEDTQNHRSS ESSFVNMTAG AAEDASHRIG 120
  121 TDERQPLLPT 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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