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View Structure Prediction Details

Protein: gi|108707929, gi...
Organism: Oryza sativa Japonica Group
Length: 358 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|108707929, gi....

Description E-value Query
Range
Subject
Range
NC100_ARATH - NAC domain-containing protein 100 OS=Arabidopsis thaliana GN=NAC100 PE=2 SV=1
310.0 [0..16] [358..11]

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Predicted Domain #1
Region A:
Residues: [1-183]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVSVMAEV EETAAAAPLD LPPGFRFHPT DEEIVSHYLT PKALNHRFSS GVIGDVDLNK  60
   61 CEPWHLPAMA KMGEKEWYFF CHKDRKYPTG TRTNRATESG YWKATGKDKE IFRGRGILVG 120
  121 MKKTLVFYLG RAPRGEKTGW VMHEFRLEGK LPSQLPRSAK DQWAVCKVFN KELALAAKNG 180
  181 PMA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 67.0
Match: 1ut4A
Description: Structure of the conserved domain of ANAC, a member of the NAC family of transcription factors
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [184-358]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VTEATADDAG IERVGSFSFL SDFIDPAELP PLMDPSFVAD IDGVDDAKVS ASTSGQAAIA  60
   61 AGFHVASQVM SYQQVKMEEP LPLPYLHQQP PRMLHSGQYF SLPAVHPGDL TPSAIRRYCK 120
  121 AEQVSGQTSA LSASRDTGLS TDPNAAGCAE ISSAPTSQPF PEFDDGILGL DDFWN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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