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View Structure Prediction Details

Protein: gi|115476064, gi...
Organism: Oryza sativa Japonica Group
Length: 310 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115476064, gi....

Description E-value Query
Range
Subject
Range
gi|38637528, gi|... - gi|50944813|ref|XP_481934.1| unknown protein [Oryza sativa (japonica cultivar-group)], gi|38637528|d...
235.0 [0..1] [309..1]

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Predicted Domain #1
Region A:
Residues: [1-66]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADTQLGCHT IGSHGIKVAK FHLYDWMILI FLAVVYGLFN IIEPFHRFVG SDMLTDLRYP  60
   61 LKGNTV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [67-310]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFWAVPLIAI VLPWAIFGGI YFKKKNVYDL HHGILGILYS VLITAVITDA IKNGVGRPRP  60
   61 DFFWRCFPDG KPNFNNVTGD VICHGERSVI KEGYKSFPSG HSSGAFAGLG FLAWYLAGKL 120
  121 KAFKREGHIA KLCLVFLPLL VASLVAVSRV DDYWHHWQDV FAGGIIGLTV ASFCYLQFFP 180
  181 YPFDADAIWP HAHFQLLAES RSNGNENSHN MGWTETDAFH EGAGAVALRD TSLVLDSMES 240
  241 GRRF

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 9.0
Match: 2akcA
Description: No description for 2akcA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle