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View Structure Prediction Details

Protein: gi|115476156, gi...
Organism: Oryza sativa Japonica Group
Length: 250 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|115476156, gi....

Description E-value Query
Range
Subject
Range
gi|42570219, gi|... - gi|79318810|ref|NP_001031104.1| ATNUDX15 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 15); hydrolas...
156.0 [0..56] [250..99]

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Predicted Domain #1
Region A:
Residues: [1-250]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTDLTIPPS MEAPGADIQA LIQRLRLHRP RPSPYAAAAA PSPDAAAPPA ELLFRPRRAA  60
   61 VLICLFRGAA GELRVLLTKR SSKLSSHSGE VSLPGGKAEE GDADDAATAL REAKEEIGLD 120
  121 PASVTVVASL EHFLSKHLLV VVPVVGILSD IQAFKPVLNV DEVDSIFDVP LEMFLKDEKR 180
  181 TSEEREWMGQ EFTIHYFNYE KGSEKYVIWG LTAGILIHAA SVVFQRPPDF PARTVQFNLP 240
  241 KYSKECSSMP 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 20.522879
Match: 1nqyA
Description: Coenzyme A pyrophosphatase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 1.86119802438676 bayes_pls_golite062009
hydrolase activity 0.0197788019342109 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle