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View Structure Prediction Details

Protein: MIAB_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 509 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MIAB_BACSU.

Description E-value Query
Range
Subject
Range
MIAB_BACLD - tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase OS=Bacillus licheniformis (strain ATCC 14580 ...
526.0 [0..1] [509..1]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNEKQKLESG QVHPSDKKSE KDYSKYFEAV YIPPSLKDAK KRGKEAVTYH NDFKISEQFK  60
   61 GLGDGRKFYI RTYGCQMNEH DTEVMAGIFM ALGYEATNSV DDANVILLNT CAIRENAENK 120
  121 VFGELGHLKA LKKNNPDLIL GVCGCMSQEE SVVNRILKKH PFVDMIFGTH NIHRLPELLS 180
  181 EAYLSKEMVV EVWSKEGDVI ENLPKVR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.97
Match: 1be1A
Description: GLUTAMATE MUTASE (B12-BINDING SUBUNIT), NMR, MINIMIZED AVERAGE STRUCTURE
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.16375783444325 bayes_pls_golite062009
catalytic activity 0.424166454243546 bayes_pls_golite062009
protein binding 0.364026609385037 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [208-509]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGKIKGWVNI MYGCDKFCTY CIVPYTRGKE RSRRPEDIIQ EVRRLASEGY KEITLLGQNV  60
   61 NAYGKDFEDM TYGLGDLMDE LRKIDIPRIR FTTSHPRDFD DRLIEVLAKG GNLLDHIHLP 120
  121 VQSGSSEVLK LMARKYDRER YMELVRKIKE AMPNASLTTD IIVGFPNETD EQFEETLSLY 180
  181 REVEFDSAYT FIYSPREGTP AAKMKDNVPM RVKKERLQRL NALVNEISAK KMKEYEGKVV 240
  241 EVLVEGESKN NPDILAGYTE KSKLVNFKGP KEAIGKIVRV KIQQAKTWSL DGEMVGEAIE 300
  301 VK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.69897
Match: 2qgqA
Description: No description for 2qgqA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle