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View Structure Prediction Details

Protein: CBP1_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 501 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CBP1_BACSU.

Description E-value Query
Range
Subject
Range
gi|238721537, gi... - gi|77975371|ref|ZP_00830907.1| COG2317: Zn-dependent carboxypeptidase [Yersinia frederiksenii ATCC 3...
725.0 [0..3] [496..1]

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Predicted Domain #1
Region A:
Residues: [1-501]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIHTYEKEF FDLLKRISHY SEAVALMHWD SRTGAPKNGS EDRAESIGQL STDIFNIQTS  60
   61 DRMKELIDVL YERFDDLSED TKKAVELAKK EYEENKKIPE AEYKEYVILC SKAETAWEEA 120
  121 KGKSDFSLFS PYLEQLIEFN KRFITYWGYQ EHPYDALLDL FEPGVTVKVL DQLFAELKEA 180
  181 IIPLVKQVTA SGNKPDTSFI TKAFPKEKQK ELSLYFLQEL GYDFDGGRLD ETVHPFATTL 240
  241 NRGDVRVTTR YDEKDFRTAI FGTIHECGHA IYEQNIDEAL SGTNLSDGAS MGIHESQSLF 300
  301 YENFIGRNKH FWTPYYKKIQ EASPVQFKDI SLDDFVRAIN ESKPSFIRVE ADELTYPLHI 360
  361 IIRYEIEKAI FSNEVSVEDL PSLWNQKYQD YLGITPQTDA EGILQDVHWA GGDFGYFPSY 420
  421 ALGYMYAAQL KQKMLEDLPE FDALLERGEF HPIKQWLTEK VHIHGKRKKP LDIIKDATGE 480
  481 ELNVRYLIDY LSNKYSNLYL L

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1wgzA
Description: Crystal structure of carboxypeptidase 1 from Thermus thermophilus
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle