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View Structure Prediction Details

Protein: YQGN_BACSU
Organism: Bacillus subtilis subsp. subtilis str. 168
Length: 187 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YQGN_BACSU.

Description E-value Query
Range
Subject
Range
gi|59712711, gi|... - gi|59712711|ref|YP_205487.1| ligase [Vibrio fischeri ES114], gi|59480812|gb|AAW86599.1| predicted li...
230.0 [0..2] [185..4]

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Predicted Domain #1
Region A:
Residues: [1-187]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSQLRKKTL EALSALSNED ILQKTERMYK YLFSLPEWQN AGTIAVTISR GLEIPTRPVI  60
   61 EQAWEEGKQV CIPKCHPDTK KMQFRTYQTD DQLETVYAGL LEPVIEKTKE VNPSQIDLMI 120
  121 VPGVCFDVNG FRVGFGGGYY DRYLSEYEGK TVSLLLECQL FAHVPRLPHD IPVHKLITED 180
  181 RIISCFS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 57.69897
Match: 1ydmA
Description: X-Ray structure of Northeast Structural Genomics target SR44
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle