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View Structure Prediction Details

Protein: gi|3845330, gi|2...
Organism: Plasmodium falciparum 3D7
Length: 230 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|3845330, gi|2....

Description E-value Query
Range
Subject
Range
gi|23612095, gi|... - gi|86171870|ref|XP_966296.1| hypothetical protein [Plasmodium falciparum 3D7], gi|46361265|emb|CAG25...
380.0 [0..1] [230..1]

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Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYFLSLFNV SLFFLLIFKY SYKNIVKKDL QDKFNKSIIT INIASRILTE NNKKWYKKYI  60
   61 YTSIFSGNKN PQKRERKNEE ENQKDNTKVD NDNNMENEME NHID

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.521 N/A N/A a.46.1 Methionine synthase domain
View Download 0.470 N/A N/A a.7.16 Description not found.
View Download 0.443 N/A N/A a.7.16 Description not found.
View Download 0.361 N/A N/A a.46.1 Methionine synthase domain
View Download 0.327 N/A N/A a.230.1 Description not found.
View Download 0.321 N/A N/A a.64.1 Saposin
View Download 0.317 N/A N/A a.74.1 Cyclin-like
View Download 0.316 N/A N/A a.74.1 Cyclin-like

Predicted Domain #2
Region A:
Residues: [105-230]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DSIDDPMDDL MNDKWEHHNS LEDRIKEYYT LTDPSDGEEN NSFFKKLKLI MNILDEVHSD  60
   61 LLINNSVTDG SIFSPELVPI SVLSTMTLAC PPIGTVTLPY ITNRINFLNR YEGQNIHTEH 120
  121 DLKIFK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle