YRC Public Data Repository - Protein Structure Prediction

Protein:	BARS_BACAM
Organism:	Bacillus amyloliquefaciens
Length:	90 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BARS_BACAM.

Description	E-value	Query Range	Subject Range
gi\|113527881, gi... - gi\|113869105\|ref\|YP_727594.1\| hypothetical protein H16_A3151 [Ralstonia eutropha H16], gi\|113527881\|...	109.0	[0..7]	[89..110]
gi\|121556352, gi... - gi\|121611712\|ref\|YP_999519.1\| hypothetical protein Veis_4809 [Verminephrobacter eiseniae EF01-2], gi...	108.0	[0..7]	[89..93]
gi\|94311917, gi\|... - gi\|94311917\|ref\|YP_585127.1\| hypothetical protein Rmet_2985 [Ralstonia metallidurans CH34], gi\|93355...	107.0	[0..7]	[89..108]
gi\|222112629, gi... - gi\|222112629\|ref\|YP_002554893.1\| Barstar (barnase inhibitor) [Diaphorobacter sp. TPSY], gi\|221732073... gi\|121596390, gi... - gi\|121596390\|ref\|YP_988286.1\| hypothetical protein Ajs_4108 [Acidovorax sp. JS42], gi\|120608470\|gb\|A...	106.0	[0..7]	[89..47]
gi\|72119943, gi\|... - gi\|73542530\|ref\|YP_297050.1\| hypothetical protein Reut_A2845 [Ralstonia eutropha JMP134], gi\|7211994...	105.0	[0..7]	[89..109]
gi\|3114444, gi\|3... - gi\|3114445\|pdb\|1A19\|B Chain B, Barstar (Free), C82a Mutant, gi\|3114444\|pdb\|1A19\|A Chain A, Barstar (...	105.0	[0..1]	[90..1]
gi\|17429787 - gi\|17429787\|emb\|CAD16472.1\| conserved hypothetical protein [Ralstonia solanacearum GMI1000] gi\|17547484 - gi\|17547484\|ref\|NP_520886.1\| hypothetical protein RSc2765 [Ralstonia solanacearum GMI1000]	105.0	[0..7]	[89..104]
gi\|54032653, gi\|... - gi\|91790682\|ref\|YP_551634.1\| hypothetical protein Bpro_4860 [Polaromonas sp. JS666], gi\|91699907\|gb\|...	104.0	[0..7]	[89..47]
gi\|91689173, gi\|... - gi\|91785219\|ref\|YP_560425.1\| hypothetical protein Bxe_A0560 [Burkholderia xenovorans LB400], gi\|9168...	103.0	[0..8]	[89..94]
gi\|111282173, gi... - gi\|120613388\|ref\|YP_973066.1\| hypothetical protein Aave_4761 [Acidovorax avenae subsp. citrulli AAC0...	103.0	[0..7]	[89..45]

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Predicted Domain #1

Region A:
Residues: [1-90]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKAVINGEQ IRSISDLHQT LKKELALPEY YGENLDALWD CLTGWVEYPL VLEWRQFEQS  60
   61 KQLTENGAES VLQVFREAKA EGCDITIILS

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	23.522879
Match:	1a19A
Description:	Barstar (barnase inhibitor)
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits